fuxialexander commited on
Commit
c401019
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1 Parent(s): 4971d57
Files changed (1) hide show
  1. Dockerfile +0 -4
Dockerfile CHANGED
@@ -21,10 +21,6 @@ ENV MPLCONFIGDIR=/app/matplotlib_cache
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  # Create the directory for Matplotlib cache
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  USER root
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  RUN mkdir -p /app/matplotlib_cache && chown $MAMBA_USER:$MAMBA_USER /app/matplotlib_cache
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- RUN mkdir -p /app/.gcell_data && chown $MAMBA_USER:$MAMBA_USER /app/.gcell_data
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- # set the permission of the directory to 777
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- RUN mkdir -p /app/.gcell_data/genomes && chown $MAMBA_USER:$MAMBA_USER /app/.gcell_data/genomes
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- # skip the genome download
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  # download https://zenodo.org/records/14615146/files/gcell_data.tar.gz?download=1 extract it and copy it to /app/.gcell_data
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  RUN wget https://zenodo.org/records/14615146/files/gcell_data.tar.gz?download=1 -O /app/gcell_data.tar.gz
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  RUN tar -xzvf /app/gcell_data.tar.gz -C /app/.gcell_data
 
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  # Create the directory for Matplotlib cache
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  USER root
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  RUN mkdir -p /app/matplotlib_cache && chown $MAMBA_USER:$MAMBA_USER /app/matplotlib_cache
 
 
 
 
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  # download https://zenodo.org/records/14615146/files/gcell_data.tar.gz?download=1 extract it and copy it to /app/.gcell_data
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  RUN wget https://zenodo.org/records/14615146/files/gcell_data.tar.gz?download=1 -O /app/gcell_data.tar.gz
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  RUN tar -xzvf /app/gcell_data.tar.gz -C /app/.gcell_data