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# Protein sequences from SCOPe-2.08
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This dataset is based on section A.4.3 of [1]. For understanding the identification of remote homology relations in hidden layers, we consider the Astral SCOPe v2.08 dataset [2], containing genetic domain sequence subsets filtered to obtain < 40% pairwise sequence identity. Each domain is hierarchically classified into fold, super-family, and family. We impose an initial filter by excluding the Rossman-like folds (c.2–c.5, c.27 and 28, c.30 and 31) and the four- to eight-bladed b-propellers (b.66–b.70), as recommended in [3]. As a result, we obtained a dataset composed of 14535 sequences. For each specific task, we define an ad hoc dataset, which we will describe in detail in the corresponding sections A.5.2 and A.6.4, essentially to ensure sufficient population in the classes
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---
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tags:
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- protein-sequences
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datasets:
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- name: SCOPe-2.08
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type: csv
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---
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# Protein sequences from SCOPe-2.08
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This dataset is based on section A.4.3 of [1]. For understanding the identification of remote homology relations in hidden layers, we consider the Astral SCOPe v2.08 dataset [2], containing genetic domain sequence subsets filtered to obtain < 40% pairwise sequence identity. Each domain is hierarchically classified into fold, super-family, and family. We impose an initial filter by excluding the Rossman-like folds (c.2–c.5, c.27 and 28, c.30 and 31) and the four- to eight-bladed b-propellers (b.66–b.70), as recommended in [3]. As a result, we obtained a dataset composed of 14535 sequences. For each specific task, we define an ad hoc dataset, which we will describe in detail in the corresponding sections A.5.2 and A.6.4, essentially to ensure sufficient population in the classes
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