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--- |
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task_categories: |
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- question-answering |
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language: |
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- en |
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tags: |
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- genetics |
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- biology |
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- medical |
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configs: |
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- config_name: default |
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data_files: |
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- split: evaluation |
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path: |
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- source1.csv |
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- source2.csv |
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- source3.csv |
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--- |
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|
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A collection of multiple-choice questions intended for students preparing for the |
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American Board of Genetic Counseling (ABGC) Certification Examination. |
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Also see the [genetic-counselor-freeform-questions](https://huggingface.co./datasets/monsoon-nlp/genetic-counselor-freeform-questions) evaluation set. |
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A genetic counselor must be prepared to answer questions about inheritance of traits, |
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medical statistics, testing, empathetic and ethical conversations with patients, |
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and observing symptoms. |
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## For evaluation only |
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The goal of this dataset is to evaluate LLMs and other AI agents on genetic counseling topics |
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in an exam format. **It is insufficient for training or finetuning an expert system.** <br/> |
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**Author cannot verify the accuracy, completeness, or relevance of the answers.** |
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Patients need personalized, expert advice beyond what can be described on an exam |
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or returned by an AI. |
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### How to evaluate |
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You can run [this LightEval evaluation](https://github.com/mapmeld/lighteval-tasks/blob/main/community_tasks/gen_counselor_evals.py) with the command: |
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``` |
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lighteval accelerate \ |
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"pretrained=meta-llama/Llama-3.1-8B-Instruct" \ |
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"community|genetic-counselor-multiple-choice|0|0" \ |
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--custom-tasks lighteval-tasks/community_tasks/gen_counselor_evals.py \ |
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--override-batch-size=5 \ |
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--use-chat-template |
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``` |
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Llama-3.1-8B-Instruct got 50.67% accuracy. I haven't been able to run all of the questions by OpenAI, but ChatGPT was doing pretty good on a sample of questions. |
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## Source information |
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### Source 1 |
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[Quizlet from 2015](https://quizlet.com/96197393/abgc-practice-test-1-022015-flash-cards/) |
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- Some answers may not be up-to-date with current practices |
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- Examples using images (pedigree) or missing multiple-choice answers are not included |
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- Hyphenization was added post-download and may not be complete |
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### Source 2 |
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[Quizlet from 2020](https://quizlet.com/527669083/abgc-practice-quiz-questions-flash-cards/) |
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### Source 3 |
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[Quizlet from 2020](https://quizlet.com/476301059/genetic-counseling-boards-review-questions-flash-cards/) |
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Some questions were removed which had multiple answers (i.e. B and C). |
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Some questions matching Source 1 are removed. |
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