CMB / README.md
fzkuji's picture
Update README.md
00d1692 verified
|
raw
history blame
8.7 kB
metadata
license: apache-2.0
task_categories:
  - question-answering
  - text-generation
language:
  - zh
tags:
  - medical
  - biology
  - chemistry
size_categories:
  - 100K<n<1M
configs:
  - config_name: CMB-Exam
    data_files:
      - split: train
        path: CMB-Exam/CMB-train/CMB-train-merge.json
      - split: val
        path: CMB-Exam/CMB-val/CMB-val-merge.json
      - split: test
        path: CMB-Exam/CMB-test/CMB-test-merge.json
  - config_name: CMB-Clin
    data_files:
      - split: test
        path: CMB-Clin/CMB-Clin-qa.json

CMB: A Comprehensive Medical Benchmark in Chinese

CMB

🌐 Github • 🌐 Website • 🤗 HuggingFace

🌈 Update

  • [2024.02.21] The answers to the CMB-Exam test has been updated and some errors caused by omissions in version management have been fixed.
  • [2024.01.08] In order to facilitate testing, we disclose the answers to the CMB-Exam test
  • [2023.09.22] CMB is included in OpenCompass.
  • [2023.08.21] Paper released.
  • [2023.08.01] 🎉🎉🎉 CMB is published!🎉🎉🎉

🌐 Download Data

  • (Recommended) Download the zip file and unzip:
    git clone "https://github.com/FreedomIntelligence/CMB.git" && cd CMB && unzip "./data/CMB.zip" -d "./data/" && rm "./data/CMB.zip"
    
  • Or load our data as follows:
    from datasets import load_dataset
    # CMB-Exam datasets (multiple-choice and multiple-answer questions)
    exam_datasets = load_dataset('FreedomIntelligence/CMB','exam')
    # CMB-Clin datasets
    clin_datasets = load_dataset('FreedomIntelligence/CMB','clin')
    

🥇 Leaderboard

Please Check Leaderboard.

🥸 Dataset intro

CMB

Components

  • CMB-Exam: Comprehensive multi-level assessment for medical knowledge

    • Structure: 6 major categories and 28 subcategories, View Catalog
    • CMB-test: 400 questions per subcategories, 11200 questions in total
    • CMB-val: 280 questions with solutions and explanations; used as source for CoT and few-shot
    • CMB-train: 269359 questions for medical knowledge injection
  • CMB-Clin: 74 cases of complex medical inquires

CMB-Exam Item

{
    "exam_type": "医师考试",
    "exam_class": "执业医师",
    "exam_subject": "口腔执业医师",
    "question": "患者,男性,11岁。近2个月来时有低热(37~38℃),全身无明显症状。查体无明显阳性体征。X线检查发现右肺中部有一直径约0.8cm类圆形病灶,边缘稍模糊,肺门淋巴结肿大。此男孩可能患",
    "answer": "D",
    "question_type": "单项选择题",
    "option": {
        "A": "小叶型肺炎",
        "B": "浸润性肺结核",
        "C": "继发性肺结核",
        "D": "原发性肺结核",
        "E": "粟粒型肺结核"
    }
},
  • exam_type: major category
  • exam_class: sub-category
  • exam_subject: Specific departments or subdivisions of disciplines
  • question_type: multiple-choice (单项选择题) or multiple-answer (多项选择题)

CMB-Clin Item

{
    "id": 0,
    "title": "案例分析-腹外疝",
    "description": "现病史\n(1)病史摘要\n     病人,男,49岁,3小时前解大便后出现右下腹疼痛,右下腹可触及一包块,既往体健。\n(2)主诉\n     右下腹痛并自扪及包块3小时。\n\n体格检查\n体温: T 37.8℃,P 101次/分,呼吸22次/分,BP 100/60mmHg,腹软,未见胃肠型蠕动波,肝脾肋下未及,于右侧腹股沟区可扪及一圆形肿块,约4cm×4cm大小,有压痛、界欠清,且肿块位于腹股沟韧带上内方。\n\n辅助检查\n(1)实验室检查\n     血常规:WBC 5.0×109/L,N 78%。\n     尿常规正常。\n(2)多普勒超声检查\n     沿腹股沟纵切可见一多层分布的混合回声区,宽窄不等,远端膨大,边界整齐,长约4~5cm。\n(3)腹部X线检查\n     可见阶梯状液气平。",
    "QA_pairs": [
        {
            "question": "简述该病人的诊断及诊断依据。",
            "solution": "诊断:嵌顿性腹股沟斜疝合并肠梗阻。\n诊断依据:\n①右下腹痛并自扪及包块3小时;\n②有腹胀、呕吐,类似肠梗阻表现;腹部平片可见阶梯状液平,考虑肠梗阻可能;腹部B超考虑,\n腹部包块内可能为肠管可能;\n③有轻度毒性反应或是中毒反应,如 T 37.8℃,P 101次/分,白细胞中性分类78%;\n④腹股沟区包块位于腹股沟韧带上内方。"
        },
        {
            "question": "简述该病人的鉴别诊断。",
            "solution": "(1)睾丸鞘膜积液:鞘膜积液所呈现的肿块完全局限在阴囊内,其上界可以清楚地摸到;用透光试验检查肿块,鞘膜积液多为透光(阳性),而疝块则不能透光。\n(2)交通性鞘膜积液:肿块的外形与睾丸鞘膜积液相似。于每日起床后或站立活动时肿块缓慢地出现并增大。平卧或睡觉后肿块逐渐缩小,挤压肿块,其体积也可逐渐缩小。透光试验为阳性。\n(3)精索鞘膜积液:肿块较小,在腹股沟管内,牵拉同侧睾丸可见肿块移动。\n(4)隐睾:腹股沟管内下降不全的睾丸可被误诊为斜疝或精索鞘膜积液。隐睾肿块较小,挤压时可出现特有的胀痛感觉。如患侧阴囊内睾丸缺如,则诊断更为明确。\n(5)急性肠梗阻:肠管被嵌顿的疝可伴发急性肠梗阻,但不应仅满足于肠梗阻的诊断而忽略疝的存在;尤其是病人比较肥胖或疝块较小时,更易发生这类问题而导致治疗上的错误。\n(6)此外,腹股沟区肿块还应与以下疾病鉴别:肿大的淋巴结、动(静)脉瘤、软组织肿瘤、脓肿、\n圆韧带囊肿、子宫内膜异位症等。"
        },
        {
            "question": "简述该病人的治疗原则。",
            "solution": "嵌顿性疝原则上需要紧急手术治疗,以防止疝内容物坏死并解除伴发的肠梗阻。术前应做好必要的准备,如有脱水和电解质紊乱,应迅速补液加以纠正。手术的关键在于正确判断疝内容物的活力,然后根据病情确定处理方法。在扩张或切开疝环、解除疝环压迫的前提下,凡肠管呈紫黑色,失去光泽和弹性,刺激后无蠕动和相应肠系膜内无动脉搏动者,即可判定为肠坏死。如肠管尚未坏死,则可将其送回腹腔,按一般易复性疝处理,即行疝囊高位结扎+疝修补术。如肠管确已坏死或一时不能肯定肠管是否已失去活力时,则应在病人全身情况允许的前提下,切除该段肠管并进行一期吻合。凡施行肠切除吻合术的病人,因手术区污染,在高位结扎疝囊后,一般不宜作疝修补术,以免因感染而致修补失败。"
        }
    ]
},
  • title: name of disease
  • description: information of patient
  • QA_pairs: a series of questions and their solutions based on the description

ℹ️ How to evaluate and submit refer to link

😘 Citation

Please use the following citation if you intend to use our dataset for training or evaluation:

@misc{cmedbenchmark,
  title={CMB: Chinese Medical Benchmark},
  author={Xidong Wang*, Guiming Hardy Chen*, Dingjie Song*, Zhiyi Zhang*, Qingying Xiao, Xiangbo Wu, Feng Jiang, Jianquan Li, Benyou Wang},
  note={Xidong Wang, Guiming Hardy Chen, Dingjie Song, and Zhiyi Zhang contributed equally to this github repo.},
  year = {2023},
  publisher = {GitHub},
  journal = {GitHub repository},
  howpublished = {\url{https://github.com/FreedomIntelligence/CMB}},
}

Acknowledgement

  • We thank Shenzhen Research Institute of Big Data for their enormous support for this project.

  • We thank the following doctors for participating in the human evaluation of CMB-Clin:

    • 林士军 (香港中文大学(深圳)附属第二医院)
    • 常河
    • 许晓爽