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license: mit

Description

Fluorescence prediction is a regression task where each input protein x is mapped to a label yR, corresponding to the log-fluorescence intensity of x.

Splits

Structure type: None

The dataset is from Evaluating Protein Transfer Learning with TAPE. We follow the original data splits, with the number of training, validation and test set shown below:

  • Train: 20963
  • Valid: 5235
  • Test: 25517

Data format

We organize all data in LMDB format. The architecture of the databse is like:

length: The number of samples

0:

  • seq: The structure-aware sequence
  • fitness: fitness label of the sequence

1:

···