# Copyright (c) Facebook, Inc. and its affiliates. from typing import Tuple import torch from torch import nn from torch.nn import functional as F from torchvision.ops import batched_nms, masks_to_boxes from detectron2.config import configurable from detectron2.data import MetadataCatalog from detectron2.modeling import META_ARCH_REGISTRY, build_backbone, build_sem_seg_head from detectron2.modeling.backbone import Backbone from detectron2.modeling.postprocessing import sem_seg_postprocess from detectron2.structures import Boxes, ImageList, Instances, BitMasks from detectron2.utils.memory import retry_if_cuda_oom from mask2former.modeling.criterion import SetCriterion from mask2former.modeling.matcher import HungarianMatcher import modeling_pretrain as vmae_tranformers import matplotlib.pyplot as plt from detectron2.utils.visualizer import Visualizer import os from detectron2.data import DatasetCatalog, MetadataCatalog from detectron2.data.datasets import register_coco_instances root = os.path.expanduser(os.getenv("DETECTRON2_DATASETS", "datasets")) register_coco_instances("cls_agnostic_coco", {}, os.path.join(root, "coco/annotations/coco_cls_agnostic_instances_val2017.json"), os.path.join(root, "coco/val2017") ) @META_ARCH_REGISTRY.register() class CWMSegmentPredictorV2(nn.Module): """ Main class for mask classification semantic segmentation architectures. """ @configurable def __init__( self, *, criterion: nn.Module, num_queries: int, object_mask_threshold: float, overlap_threshold: float, metadata, size_divisibility: int, sem_seg_postprocess_before_inference: bool, pixel_mean: Tuple[float], pixel_std: Tuple[float], # inference semantic_on: bool, panoptic_on: bool, instance_on: bool, test_topk_per_image: int, output_dir: str, ): """ Args: backbone: a backbone module, must follow detectron2's backbone interface sem_seg_head: a module that predicts semantic segmentation from backbone features criterion: a module that defines the loss num_queries: int, number of queries object_mask_threshold: float, threshold to filter query based on classification score for panoptic segmentation inference overlap_threshold: overlap threshold used in general inference for panoptic segmentation metadata: dataset meta, get `thing` and `stuff` category names for panoptic segmentation inference size_divisibility: Some backbones require the input height and width to be divisible by a specific integer. We can use this to override such requirement. sem_seg_postprocess_before_inference: whether to resize the prediction back to original input size before semantic segmentation inference or after. For high-resolution dataset like Mapillary, resizing predictions before inference will cause OOM error. pixel_mean, pixel_std: list or tuple with #channels element, representing the per-channel mean and std to be used to normalize the input image semantic_on: bool, whether to output semantic segmentation prediction instance_on: bool, whether to output instance segmentation prediction panoptic_on: bool, whether to output panoptic segmentation prediction test_topk_per_image: int, instance segmentation parameter, keep topk instances per image """ super().__init__() self.criterion = criterion self.num_queries = num_queries self.overlap_threshold = overlap_threshold self.object_mask_threshold = object_mask_threshold self.metadata = metadata if size_divisibility < 0: # use backbone size_divisibility if not set size_divisibility = self.backbone.size_divisibility self.size_divisibility = size_divisibility self.sem_seg_postprocess_before_inference = sem_seg_postprocess_before_inference self.register_buffer("pixel_mean", torch.Tensor(pixel_mean).view(-1, 1, 1), False) self.register_buffer("pixel_std", torch.Tensor(pixel_std).view(-1, 1, 1), False) # additional args self.semantic_on = semantic_on self.instance_on = instance_on self.panoptic_on = panoptic_on self.test_topk_per_image = test_topk_per_image if not self.semantic_on: assert self.sem_seg_postprocess_before_inference # Load CWM predictor self.output_dir = output_dir if 'cwm' in output_dir: model_func = vmae_tranformers.base_8x8patch_2frames_1tube_flash predictor = model_func().cuda() load_path = '/ccn2/u/feigelis/model_checkpoints/kevin_checkpoints/' + \ 'fulltrain_kinetics_8x8patch_rotated_table_distributed_with_ddp' + \ '_copied_from_oldnode/checkpoint-3199.pth' did_load = predictor.load_state_dict(torch.load(load_path, map_location=torch.device("cpu"))['model']) print('Load CWM pretrained predictor', did_load) self.predictor = predictor.eval().requires_grad_(False) self.num_patches = self.predictor.encoder.num_patches self.patch_size = self.predictor.encoder.patch_size[-1] self.mask_ratio = 0.99 num_hidden_layers = 4 hidden_dim = 1024 input_dim = self.predictor.decoder.embed_dim decoder_layers = [torch.nn.Linear(input_dim, hidden_dim), torch.nn.ReLU()] for i in range(num_hidden_layers): decoder_layers.append(torch.nn.Linear(hidden_dim, hidden_dim)) decoder_layers.append(torch.nn.ReLU()) decoder_layers.append(torch.nn.Linear(hidden_dim, num_queries)) self.decoder = torch.nn.Sequential(*decoder_layers).cuda() @classmethod def from_config(cls, cfg): # Loss parameters: no_object_weight = cfg.MODEL.MASK_FORMER.NO_OBJECT_WEIGHT # loss weights class_weight = cfg.MODEL.MASK_FORMER.CLASS_WEIGHT dice_weight = cfg.MODEL.MASK_FORMER.DICE_WEIGHT mask_weight = cfg.MODEL.MASK_FORMER.MASK_WEIGHT # building criterion matcher = HungarianMatcher( cost_class=class_weight, cost_mask=mask_weight, cost_dice=dice_weight, num_points=cfg.MODEL.MASK_FORMER.TRAIN_NUM_POINTS, ) weight_dict = {"loss_mask": mask_weight, "loss_dice": dice_weight} losses = ["masks"] criterion = SetCriterion( num_classes=80, matcher=matcher, weight_dict=weight_dict, eos_coef=no_object_weight, losses=losses, num_points=cfg.MODEL.MASK_FORMER.TRAIN_NUM_POINTS, oversample_ratio=cfg.MODEL.MASK_FORMER.OVERSAMPLE_RATIO, importance_sample_ratio=cfg.MODEL.MASK_FORMER.IMPORTANCE_SAMPLE_RATIO, ) return { "criterion": criterion, "num_queries": cfg.MODEL.MASK_FORMER.NUM_OBJECT_QUERIES, "object_mask_threshold": cfg.MODEL.MASK_FORMER.TEST.OBJECT_MASK_THRESHOLD, "overlap_threshold": cfg.MODEL.MASK_FORMER.TEST.OVERLAP_THRESHOLD, "metadata": MetadataCatalog.get(cfg.DATASETS.TRAIN[0]), "size_divisibility": cfg.MODEL.MASK_FORMER.SIZE_DIVISIBILITY, "sem_seg_postprocess_before_inference": ( cfg.MODEL.MASK_FORMER.TEST.SEM_SEG_POSTPROCESSING_BEFORE_INFERENCE or cfg.MODEL.MASK_FORMER.TEST.PANOPTIC_ON or cfg.MODEL.MASK_FORMER.TEST.INSTANCE_ON ), "pixel_mean": cfg.MODEL.PIXEL_MEAN, "pixel_std": cfg.MODEL.PIXEL_STD, # inference "semantic_on": cfg.MODEL.MASK_FORMER.TEST.SEMANTIC_ON, "instance_on": cfg.MODEL.MASK_FORMER.TEST.INSTANCE_ON, "panoptic_on": cfg.MODEL.MASK_FORMER.TEST.PANOPTIC_ON, "test_topk_per_image": cfg.TEST.DETECTIONS_PER_IMAGE, "output_dir": cfg.OUTPUT_DIR, } @property def device(self): return self.pixel_mean.device def forward(self, batched_inputs): """ Args: batched_inputs: a list, batched outputs of :class:`DatasetMapper`. Each item in the list contains the inputs for one image. For now, each item in the list is a dict that contains: * "image": Tensor, image in (C, H, W) format. * "instances": per-region ground truth * Other information that's included in the original dicts, such as: "height", "width" (int): the output resolution of the model (may be different from input resolution), used in inference. Returns: list[dict]: each dict has the results for one image. The dict contains the following keys: * "sem_seg": A Tensor that represents the per-pixel segmentation prediced by the head. The prediction has shape KxHxW that represents the logits of each class for each pixel. * "panoptic_seg": A tuple that represent panoptic output panoptic_seg (Tensor): of shape (height, width) where the values are ids for each segment. segments_info (list[dict]): Describe each segment in `panoptic_seg`. Each dict contains keys "id", "category_id", "isthing". """ images = [x["image"].to(self.device) for x in batched_inputs] images = [(x - self.pixel_mean) / self.pixel_std for x in images] images = ImageList.from_tensors(images, self.size_divisibility) ### # image_size = images.image_sizes[0] # processed_results = [] # input_per_image = batched_inputs[0] # height = input_per_image.get("height", image_size[0]) # width = input_per_image.get("width", image_size[1]) # # gt_instances = [x["instances"] for x in batched_inputs] # targets = [] # for targets_per_image in gt_instances: # # pad gt # try: # gt_masks = targets_per_image.gt_masks # except: # print('NO GT MASKS') # gt_masks = torch.zeros(1, height, width) # # targets.append( # { # "labels": targets_per_image.gt_classes, # "masks": gt_masks, # } # ) # # mask_cls_results = torch.ones(1, self.num_queries, 81)#.to(self.device) # mask_pred_result = targets[0]['masks']#.to(self.device) # # processed_results.append({}) # if self.instance_on: # instance_r = retry_if_cuda_oom(self.instance_inference)(mask_cls_results[0], mask_pred_result) # processed_results[-1]["instances"] = instance_r # return processed_results ### with torch.cuda.amp.autocast(enabled=True): with torch.no_grad(): if not self.training: # resize to patch size x = F.interpolate(images.tensor, size=(224, 224), mode="bilinear", align_corners=False) x = x.to(torch.float16).unsqueeze(2).expand(-1, -1, 2, -1, -1) else: x = images.tensor.to(torch.float16).unsqueeze(2).expand(-1, -1, 2, -1, -1) # mask out the second frame mask = torch.zeros([x.shape[0], self.num_patches]).to(x.device).bool() mask[:, int(self.num_patches // 2):] = 1 # num_visibles = int((1 - self.mask_ratio) * int(self.num_patches // 2)) + 1 # rand_idx = torch.randint(low=int(self.num_patches//2), high=self.num_patches, size=(x.shape[0], int(num_visibles))) # for i in range(x.shape[0]): # mask[i, rand_idx[i]] = 0 feature = self.predictor.encoder(x, mask=mask) feature = self.predictor.encoder_to_decoder(feature) # out = self.predictor(x, mask) logits = self.decoder(feature).float() B, N, _ = logits.shape pred_masks = logits.view(B, int(N ** 0.5), int(N ** 0.5), self.num_queries).permute(0, 3, 1, 2) # [B, num_queries, H, W] outputs = {"pred_masks": pred_masks} if self.training: # mask classification target if "instances" in batched_inputs[0]: gt_instances = [x["instances"].to(self.device) for x in batched_inputs] targets = self.prepare_targets(gt_instances, images) else: targets = None # bipartite matching-based loss losses = self.criterion(outputs, targets) for k in list(losses.keys()): if k in self.criterion.weight_dict: losses[k] *= self.criterion.weight_dict[k] else: # remove this loss if not specified in `weight_dict` losses.pop(k) return losses else: # mask_cls_results = outputs["pred_logits"] mask_cls_results = torch.ones(x.shape[0], self.num_queries, 81).to(self.device) mask_pred_results = outputs["pred_masks"] # upsample masks mask_pred_results = F.interpolate( mask_pred_results, size=(images.tensor.shape[-2], images.tensor.shape[-1]), mode="bilinear", align_corners=False, ) # if "instances" in batched_inputs[0]: # gt_instances = [x["instances"].to(self.device) for x in batched_inputs] # targets = self.prepare_targets(gt_instances, images) # else: # targets = None del outputs processed_results = [] for mask_cls_result, mask_pred_result, input_per_image, image_size in zip( mask_cls_results, mask_pred_results, batched_inputs, images.image_sizes ): height = input_per_image.get("height", image_size[0]) width = input_per_image.get("width", image_size[1]) processed_results.append({}) if self.sem_seg_postprocess_before_inference: mask_pred_result = retry_if_cuda_oom(sem_seg_postprocess)( mask_pred_result, image_size, height, width ) mask_cls_result = mask_cls_result.to(mask_pred_result) # semantic segmentation inference if self.semantic_on: r = retry_if_cuda_oom(self.semantic_inference)(mask_cls_result, mask_pred_result) if not self.sem_seg_postprocess_before_inference: r = retry_if_cuda_oom(sem_seg_postprocess)(r, image_size, height, width) processed_results[-1]["sem_seg"] = r # panoptic segmentation inference if self.panoptic_on: panoptic_r = retry_if_cuda_oom(self.panoptic_inference)(mask_cls_result, mask_pred_result) processed_results[-1]["panoptic_seg"] = panoptic_r # instance segmentation inference if self.instance_on: instance_r, nms_idx = retry_if_cuda_oom(self.instance_inference)(mask_cls_result, mask_pred_result) processed_results[-1]["instances"] = instance_r # Visualization ''' rgb_image = F.interpolate(images.tensor.float(), size=(height, width), mode='bilinear') visualizer = Visualizer(rgb_image.cpu().detach()[0].permute(1,2,0)) visualizer = visualizer.draw_instance_predictions(instance_r) recon = torch.zeros(1, self.num_patches, self.patch_size ** 2 * 3) recon[mask] = out.float().cpu().detach() recon = self.unpatchify(recon[:, int(self.num_patches // 2):]) recon = recon[0].permute(1, 2, 0).float().clamp(0, 1) # fig, axs = plt.subplots(1, 7, figsize=(20, 3)) # # axs[0].imshow(images.tensor.float()[0].permute(1, 2, 0).cpu().detach()) # axs[1].imshow(images.tensor.float()[0].permute(1, 2, 0).cpu().detach()) # # axs[1].imshow(batched_inputs[0]['instances'].gt_masks.argmax(0)) # axs[2].imshow(recon) # axs[3].imshow(feature[0].view(28, 28, -1)[..., 0:3].cpu().detach().float()) # axs[4].imshow(feature[0].view(28, 28, -1)[..., 100:103].cpu().detach().float()) # axs[5].imshow(feature[0].view(28, 28, -1)[..., 200:203].cpu().detach().float()) # axs[6].imshow(visualizer.get_image()) file_name = batched_inputs[0]['file_name'].split('/')[-1].split('.jpg')[0] # for a in axs: # a.set_axis_off() fig, axs = plt.subplots(1, 2, figsize=(16, 6)) axs[0].imshow(images.tensor.float()[0].permute(1, 2, 0).cpu().detach()) axs[1].imshow(visualizer.get_image()) plt.savefig(f"/ccn2/u/honglinc/temp/{file_name}.png", bbox_inches='tight') fig, axs = plt.subplots(10, 10, figsize=(10, 10)) for a in axs: for _a in a: _a.set_axis_off() for i in range(mask_pred_result.shape[0]): # print(mask_pred_result.shape, height, width) mask_area_ratio = mask_pred_result[i].sigmoid().float().flatten().sum() / (height * width) axs[i // 10, i % 10].imshow(mask_pred_result[i].cpu().detach() > 0) nms = 1 if i in nms_idx else -1 axs[i // 10, i % 10].set_title(f'{mask_area_ratio.item():.2f}, {nms}', fontsize=11) plt.savefig(f"/ccn2/u/honglinc/temp/{file_name}_mask.png", bbox_inches='tight') ''' return processed_results def prepare_targets(self, targets, images): h_pad, w_pad = images.tensor.shape[-2:] new_targets = [] for targets_per_image in targets: # pad gt gt_masks = targets_per_image.gt_masks padded_masks = torch.zeros((gt_masks.shape[0], h_pad, w_pad), dtype=gt_masks.dtype, device=gt_masks.device) padded_masks[:, : gt_masks.shape[1], : gt_masks.shape[2]] = gt_masks new_targets.append( { "labels": targets_per_image.gt_classes, "masks": padded_masks, } ) return new_targets def semantic_inference(self, mask_cls, mask_pred): mask_cls = F.softmax(mask_cls, dim=-1)[..., :-1] mask_pred = mask_pred.sigmoid() semseg = torch.einsum("qc,qhw->chw", mask_cls, mask_pred) return semseg def panoptic_inference(self, mask_cls, mask_pred): scores, labels = F.softmax(mask_cls, dim=-1).max(-1) mask_pred = mask_pred.sigmoid() keep = labels.ne(self.sem_seg_head.num_classes) & (scores > self.object_mask_threshold) cur_scores = scores[keep] cur_classes = labels[keep] cur_masks = mask_pred[keep] cur_mask_cls = mask_cls[keep] cur_mask_cls = cur_mask_cls[:, :-1] cur_prob_masks = cur_scores.view(-1, 1, 1) * cur_masks h, w = cur_masks.shape[-2:] panoptic_seg = torch.zeros((h, w), dtype=torch.int32, device=cur_masks.device) segments_info = [] current_segment_id = 0 if cur_masks.shape[0] == 0: # We didn't detect any mask :( return panoptic_seg, segments_info else: # take argmax cur_mask_ids = cur_prob_masks.argmax(0) stuff_memory_list = {} for k in range(cur_classes.shape[0]): pred_class = cur_classes[k].item() isthing = pred_class in self.metadata.thing_dataset_id_to_contiguous_id.values() mask_area = (cur_mask_ids == k).sum().item() original_area = (cur_masks[k] >= 0.5).sum().item() mask = (cur_mask_ids == k) & (cur_masks[k] >= 0.5) if mask_area > 0 and original_area > 0 and mask.sum().item() > 0: if mask_area / original_area < self.overlap_threshold: continue # merge stuff regions if not isthing: if int(pred_class) in stuff_memory_list.keys(): panoptic_seg[mask] = stuff_memory_list[int(pred_class)] continue else: stuff_memory_list[int(pred_class)] = current_segment_id + 1 current_segment_id += 1 panoptic_seg[mask] = current_segment_id segments_info.append( { "id": current_segment_id, "isthing": bool(isthing), "category_id": int(pred_class), } ) return panoptic_seg, segments_info def instance_inference(self, mask_cls, mask_pred): # mask_pred is already processed to have the same shape as original input image_size = mask_pred.shape[-2:] mask_area_ratio = (mask_pred > 0).float().flatten(1, 2).sum(1) / (image_size[0] * image_size[1]) mask_area_filter = (mask_area_ratio > 0.01) & (mask_area_ratio < 0.9) mask_pred = mask_pred[mask_area_filter] original_idx = torch.arange(mask_area_filter.shape[0])[mask_area_filter] try: box = masks_to_boxes(mask_pred > 0) scores = (mask_pred.sigmoid().flatten(1) * (mask_pred > 0).flatten(1)).sum(1) / ( (mask_pred > 0).flatten(1).sum(1) + 1e-6) nms_idx = batched_nms(box, scores, torch.zeros(box.shape[0]).long(), 0.3) mask_pred = mask_pred[nms_idx] box = box[nms_idx] except Exception as e: import pdb; pdb.set_trace() print(e, mask_pred.shape, mask_area_filter.sum()) box = torch.zeros(mask_pred.shape[0], 4).to(mask_pred) nms_idx = original_idx[nms_idx] mask_pred = mask_pred.cpu() result = Instances(image_size) # mask (before sigmoid) result.pred_masks = (mask_pred > 0).float() result.pred_boxes = Boxes(box.cpu()) # Uncomment the following to get boxes from masks (this is slow) # result.pred_boxes = BitMasks(mask_pred > 0).get_bounding_boxes() # calculate average mask prob mask_scores_per_image = (mask_pred.sigmoid().flatten(1) * result.pred_masks.flatten(1)).sum(1) / ( result.pred_masks.flatten(1).sum(1) + 1e-6) scores_per_image = torch.ones(mask_pred.size(0)).to(mask_pred.device) labels_per_image = torch.zeros(mask_pred.size(0)).to(mask_pred.device) result.scores = scores_per_image * mask_scores_per_image result.pred_classes = labels_per_image return result, nms_idx def unpatchify(self, x): """ x: (N, L, patch_size**2 *3) imgs: (N, 3, H, W) """ p = self.patch_size h = w = int(x.shape[1] ** .5) assert h * w == x.shape[1] x = x.reshape(shape=(x.shape[0], h, w, p, p, 3)) x = torch.einsum('nhwpqc->nchpwq', x) imgs = x.reshape(shape=(x.shape[0], 3, h * p, h * p)) return imgs