Upload Sort_Sco_Kcat.py

Sort_Sco_Kcat.py

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+from tname import *
+from Rfile import *
+
+
+def Sort_Sco_Kcat(file):
+    dlkcats = []
+    contents = j_reads(file.name)
+
+    # dlkcat sort根据kcat值对文件进行排序
+    name = Name()
+    kcatname = name + r"mkcat_sort.fa"  # 结果文件名称
+    for i in range(2, len(contents)):
+        content = contents[i].split()
+        dlkcats.append(float(content[3]))
+    s_dlkcat = []
+    s_dlkcat = sorted(range(len(dlkcats)), key=lambda k: dlkcats[k], reverse=True)
+
+    # 写入文件
+    with open(kcatname, "a") as f:
+        f.write(contents[0])
+        # 第一行第二行不参与排序，直接写入
+        f.write(contents[1])
+
+    # 写入剩下的行
+    for i in range(0, len(dlkcats)):
+        with open(kcatname, "a") as f:
+            f.write(contents[s_dlkcat[i]+2])
+    return kcatname