jfachrel commited on
Commit
bc05e51
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1 Parent(s): 855de96

Upload 5 files

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Files changed (5) hide show
  1. app.py +37 -0
  2. history.pt +3 -0
  3. model.pt +3 -0
  4. requirements.txt +3 -0
  5. utils.py +29 -0
app.py ADDED
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+ import streamlit as st
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+ from PIL import Image
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+
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+ from utils import Predict
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+
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+ # Page settings
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+ st.set_page_config(
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+ page_title="Image Classification",
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+ layout="wide",
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+ initial_sidebar_state="expanded"
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+ )
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+
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+ # Title
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+ st.title('Classification of Chest X-ray Images')
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+
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+ # Upload file
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+ uploaded_file = st.file_uploader(label="Choose a file", type=['jpg', 'jpeg','png'])
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+
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+ sidebar = st.sidebar
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+
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+ if uploaded_file is not None:
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+ image = Image.open(uploaded_file).convert('RGB')
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+ # image = np.array(image)
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+ predict = Predict()
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+
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+ col1, col2 = st.columns([0.5, 0.5])
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+
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+ #Col 1
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+ with col1:
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+ st.markdown('<p style="text-align: center;">Input Image</p>', unsafe_allow_html=True)
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+ st.image(image, width=425, caption="X-Ray Image")
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+
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+ #Col 2
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+ with col2:
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+ pred,topk = predict.predict(image)
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+ st.text("Prediction: "+ pred)
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+ st.text("Confidence: "+ str(topk))
history.pt ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:f8617c399a6ff43caf7dd8f1e4a0d44671608ce5bb7caab017073495a20fa894
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+ size 1007
model.pt ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:ec5f2a733488ccbdac6a9661278b89e927260720b732baf7136fd7fb32abae46
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+ size 96471677
requirements.txt ADDED
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+ streamlit
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+ torch
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+ torchvision
utils.py ADDED
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+ import torch
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+ from torchvision import transforms
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+
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+ class Predict():
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+ def __init__(self):
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+ self.transform = transforms.Compose([
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+ transforms.Resize(size=256),
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+ transforms.CenterCrop(size=224),
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+ transforms.ToTensor(),
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+ transforms.Normalize([0.485, 0.456, 0.406],[0.229, 0.224, 0.225])
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+ ])
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+
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+ self.model = torch.load("model.pt",map_location=torch.device('cpu'))
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+ self.class_dict = {0: 'COVID', 1: 'Normal', 2: 'Pneumonia'}
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+
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+ def predict(self, image):
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+ test_image_tensor = self.transform(image)
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+ if torch.cuda.is_available():
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+ test_image_tensor = test_image_tensor.view(1, 3, 224, 224).cuda()
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+ else:
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+ test_image_tensor = test_image_tensor.view(1, 3, 224, 224)
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+ with torch.no_grad():
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+ self.model.eval()
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+ # Model outputs log probabilities
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+ out = self.model(test_image_tensor)
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+ ps = torch.exp(out)
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+ topk, topclass = ps.topk(1, dim=1)
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+
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+ return self.class_dict[topclass.cpu().numpy()[0][0]], topk.numpy()[0][0]