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from itertools import repeat |
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import collections.abc |
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import numpy as np |
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import torch |
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import torch.nn as nn |
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import torch.nn.functional as F |
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import torch.utils.checkpoint as checkpoint |
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from networks.layers.basic import DropPath |
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def _ntuple(n): |
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def parse(x): |
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if isinstance(x, collections.abc.Iterable): |
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return x |
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return tuple(repeat(x, n)) |
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return parse |
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to_2tuple = _ntuple(2) |
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def trunc_normal_(tensor, mean=0, std=1): |
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size = tensor.shape |
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tmp = tensor.new_empty(size + (4, )).normal_() |
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valid = (tmp < 2) & (tmp > -2) |
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ind = valid.max(-1, keepdim=True)[1] |
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tensor.data.copy_(tmp.gather(-1, ind).squeeze(-1)) |
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tensor.data.mul_(std).add_(mean) |
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return tensor |
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class Mlp(nn.Module): |
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""" Multilayer perceptron.""" |
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def __init__(self, |
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in_features, |
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hidden_features=None, |
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out_features=None, |
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act_layer=nn.GELU, |
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drop=0.): |
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super().__init__() |
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out_features = out_features or in_features |
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hidden_features = hidden_features or in_features |
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self.fc1 = nn.Linear(in_features, hidden_features) |
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self.act = act_layer() |
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self.fc2 = nn.Linear(hidden_features, out_features) |
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self.drop = nn.Dropout(drop) |
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|
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def forward(self, x): |
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x = self.fc1(x) |
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x = self.act(x) |
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x = self.drop(x) |
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x = self.fc2(x) |
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x = self.drop(x) |
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return x |
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def window_partition(x, window_size): |
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""" |
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Args: |
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x: (B, H, W, C) |
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window_size (int): window size |
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Returns: |
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windows: (num_windows*B, window_size, window_size, C) |
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""" |
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B, H, W, C = x.shape |
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x = x.view(B, H // window_size, window_size, W // window_size, window_size, |
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C) |
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windows = x.permute(0, 1, 3, 2, 4, |
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5).contiguous().view(-1, window_size, window_size, C) |
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return windows |
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def window_reverse(windows, window_size, H, W): |
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""" |
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Args: |
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windows: (num_windows*B, window_size, window_size, C) |
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window_size (int): Window size |
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H (int): Height of image |
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W (int): Width of image |
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Returns: |
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x: (B, H, W, C) |
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""" |
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B = int(windows.shape[0] / (H * W / window_size / window_size)) |
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x = windows.view(B, H // window_size, W // window_size, window_size, |
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window_size, -1) |
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x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, H, W, -1) |
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return x |
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class WindowAttention(nn.Module): |
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""" Window based multi-head self attention (W-MSA) module with relative position bias. |
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It supports both of shifted and non-shifted window. |
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Args: |
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dim (int): Number of input channels. |
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window_size (tuple[int]): The height and width of the window. |
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num_heads (int): Number of attention heads. |
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qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True |
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qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set |
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attn_drop (float, optional): Dropout ratio of attention weight. Default: 0.0 |
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proj_drop (float, optional): Dropout ratio of output. Default: 0.0 |
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""" |
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def __init__(self, |
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dim, |
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window_size, |
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num_heads, |
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qkv_bias=True, |
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qk_scale=None, |
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attn_drop=0., |
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proj_drop=0.): |
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super().__init__() |
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self.dim = dim |
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self.window_size = window_size |
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self.num_heads = num_heads |
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head_dim = dim // num_heads |
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self.scale = qk_scale or head_dim**-0.5 |
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self.relative_position_bias_table = nn.Parameter( |
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torch.zeros((2 * window_size[0] - 1) * (2 * window_size[1] - 1), |
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num_heads)) |
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coords_h = torch.arange(self.window_size[0]) |
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coords_w = torch.arange(self.window_size[1]) |
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coords = torch.stack(torch.meshgrid([coords_h, coords_w])) |
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coords_flatten = torch.flatten(coords, 1) |
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relative_coords = coords_flatten[:, :, |
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None] - coords_flatten[:, |
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None, :] |
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relative_coords = relative_coords.permute( |
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1, 2, 0).contiguous() |
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relative_coords[:, :, |
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0] += self.window_size[0] - 1 |
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relative_coords[:, :, 1] += self.window_size[1] - 1 |
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relative_coords[:, :, 0] *= 2 * self.window_size[1] - 1 |
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relative_position_index = relative_coords.sum(-1) |
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self.register_buffer("relative_position_index", |
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relative_position_index) |
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self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias) |
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self.attn_drop = nn.Dropout(attn_drop) |
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self.proj = nn.Linear(dim, dim) |
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self.proj_drop = nn.Dropout(proj_drop) |
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trunc_normal_(self.relative_position_bias_table, std=.02) |
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self.softmax = nn.Softmax(dim=-1) |
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def forward(self, x, mask=None): |
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""" Forward function. |
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Args: |
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x: input features with shape of (num_windows*B, N, C) |
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mask: (0/-inf) mask with shape of (num_windows, Wh*Ww, Wh*Ww) or None |
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""" |
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B_, N, C = x.shape |
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qkv = self.qkv(x).reshape(B_, N, 3, self.num_heads, |
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C // self.num_heads).permute(2, 0, 3, 1, 4) |
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q, k, v = qkv[0], qkv[1], qkv[ |
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2] |
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q = q * self.scale |
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attn = (q @ k.transpose(-2, -1)) |
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relative_position_bias = self.relative_position_bias_table[ |
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self.relative_position_index.view(-1)].view( |
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self.window_size[0] * self.window_size[1], |
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self.window_size[0] * self.window_size[1], |
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-1) |
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relative_position_bias = relative_position_bias.permute( |
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2, 0, 1).contiguous() |
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attn = attn + relative_position_bias.unsqueeze(0) |
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if mask is not None: |
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nW = mask.shape[0] |
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attn = attn.view(B_ // nW, nW, self.num_heads, N, |
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N) + mask.unsqueeze(1).unsqueeze(0) |
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attn = attn.view(-1, self.num_heads, N, N) |
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attn = self.softmax(attn) |
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else: |
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attn = self.softmax(attn) |
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attn = self.attn_drop(attn) |
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x = (attn @ v).transpose(1, 2).reshape(B_, N, C) |
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x = self.proj(x) |
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x = self.proj_drop(x) |
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return x |
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class SwinTransformerBlock(nn.Module): |
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""" Swin Transformer Block. |
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Args: |
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dim (int): Number of input channels. |
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num_heads (int): Number of attention heads. |
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window_size (int): Window size. |
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shift_size (int): Shift size for SW-MSA. |
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mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. |
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qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True |
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qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set. |
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drop (float, optional): Dropout rate. Default: 0.0 |
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attn_drop (float, optional): Attention dropout rate. Default: 0.0 |
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drop_path (float, optional): Stochastic depth rate. Default: 0.0 |
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act_layer (nn.Module, optional): Activation layer. Default: nn.GELU |
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norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm |
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""" |
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def __init__(self, |
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dim, |
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num_heads, |
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window_size=7, |
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shift_size=0, |
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mlp_ratio=4., |
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qkv_bias=True, |
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qk_scale=None, |
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drop=0., |
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attn_drop=0., |
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drop_path=0., |
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act_layer=nn.GELU, |
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norm_layer=nn.LayerNorm): |
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super().__init__() |
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self.dim = dim |
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self.num_heads = num_heads |
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self.window_size = window_size |
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self.shift_size = shift_size |
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self.mlp_ratio = mlp_ratio |
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assert 0 <= self.shift_size < self.window_size, "shift_size must in 0-window_size" |
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self.norm1 = norm_layer(dim) |
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self.attn = WindowAttention(dim, |
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window_size=to_2tuple(self.window_size), |
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num_heads=num_heads, |
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qkv_bias=qkv_bias, |
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qk_scale=qk_scale, |
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attn_drop=attn_drop, |
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proj_drop=drop) |
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self.drop_path = DropPath( |
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drop_path) if drop_path > 0. else nn.Identity() |
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self.norm2 = norm_layer(dim) |
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mlp_hidden_dim = int(dim * mlp_ratio) |
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self.mlp = Mlp(in_features=dim, |
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hidden_features=mlp_hidden_dim, |
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act_layer=act_layer, |
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drop=drop) |
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self.H = None |
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self.W = None |
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|
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def forward(self, x, mask_matrix): |
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""" Forward function. |
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Args: |
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x: Input feature, tensor size (B, H*W, C). |
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H, W: Spatial resolution of the input feature. |
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mask_matrix: Attention mask for cyclic shift. |
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""" |
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B, L, C = x.shape |
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H, W = self.H, self.W |
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assert L == H * W, "input feature has wrong size" |
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shortcut = x |
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x = self.norm1(x) |
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x = x.view(B, H, W, C) |
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pad_l = pad_t = 0 |
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pad_r = (self.window_size - W % self.window_size) % self.window_size |
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pad_b = (self.window_size - H % self.window_size) % self.window_size |
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x = F.pad(x, (0, 0, pad_l, pad_r, pad_t, pad_b)) |
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_, Hp, Wp, _ = x.shape |
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|
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if self.shift_size > 0: |
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shifted_x = torch.roll(x, |
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shifts=(-self.shift_size, -self.shift_size), |
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dims=(1, 2)) |
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attn_mask = mask_matrix |
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else: |
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shifted_x = x |
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attn_mask = None |
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|
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x_windows = window_partition( |
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shifted_x, self.window_size) |
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x_windows = x_windows.view(-1, self.window_size * self.window_size, |
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C) |
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attn_windows = self.attn( |
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x_windows, mask=attn_mask) |
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attn_windows = attn_windows.view(-1, self.window_size, |
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self.window_size, C) |
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shifted_x = window_reverse(attn_windows, self.window_size, Hp, |
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Wp) |
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|
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if self.shift_size > 0: |
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x = torch.roll(shifted_x, |
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shifts=(self.shift_size, self.shift_size), |
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dims=(1, 2)) |
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else: |
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x = shifted_x |
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|
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if pad_r > 0 or pad_b > 0: |
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x = x[:, :H, :W, :].contiguous() |
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|
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x = x.view(B, H * W, C) |
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|
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|
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x = shortcut + self.drop_path(x) |
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x = x + self.drop_path(self.mlp(self.norm2(x))) |
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return x |
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|
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class PatchMerging(nn.Module): |
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""" Patch Merging Layer |
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Args: |
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dim (int): Number of input channels. |
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norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm |
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""" |
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def __init__(self, dim, norm_layer=nn.LayerNorm): |
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super().__init__() |
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self.dim = dim |
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self.reduction = nn.Linear(4 * dim, 2 * dim, bias=False) |
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self.norm = norm_layer(4 * dim) |
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|
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def forward(self, x, H, W): |
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""" Forward function. |
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Args: |
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x: Input feature, tensor size (B, H*W, C). |
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H, W: Spatial resolution of the input feature. |
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""" |
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B, L, C = x.shape |
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assert L == H * W, "input feature has wrong size" |
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x = x.view(B, H, W, C) |
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pad_input = (H % 2 == 1) or (W % 2 == 1) |
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if pad_input: |
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x = F.pad(x, (0, 0, 0, W % 2, 0, H % 2)) |
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|
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x0 = x[:, 0::2, 0::2, :] |
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x1 = x[:, 1::2, 0::2, :] |
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x2 = x[:, 0::2, 1::2, :] |
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x3 = x[:, 1::2, 1::2, :] |
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x = torch.cat([x0, x1, x2, x3], -1) |
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x = x.view(B, -1, 4 * C) |
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|
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x = self.norm(x) |
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x = self.reduction(x) |
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return x |
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|
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class BasicLayer(nn.Module): |
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""" A basic Swin Transformer layer for one stage. |
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Args: |
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dim (int): Number of feature channels |
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depth (int): Depths of this stage. |
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num_heads (int): Number of attention head. |
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window_size (int): Local window size. Default: 7. |
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mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. Default: 4. |
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qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True |
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qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set. |
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drop (float, optional): Dropout rate. Default: 0.0 |
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attn_drop (float, optional): Attention dropout rate. Default: 0.0 |
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drop_path (float | tuple[float], optional): Stochastic depth rate. Default: 0.0 |
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norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm |
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downsample (nn.Module | None, optional): Downsample layer at the end of the layer. Default: None |
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use_checkpoint (bool): Whether to use checkpointing to save memory. Default: False. |
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""" |
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def __init__(self, |
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dim, |
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depth, |
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num_heads, |
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window_size=7, |
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mlp_ratio=4., |
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qkv_bias=True, |
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qk_scale=None, |
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drop=0., |
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attn_drop=0., |
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drop_path=0., |
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norm_layer=nn.LayerNorm, |
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downsample=None, |
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use_checkpoint=False): |
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super().__init__() |
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self.window_size = window_size |
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self.shift_size = window_size // 2 |
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self.depth = depth |
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self.use_checkpoint = use_checkpoint |
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|
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self.blocks = nn.ModuleList([ |
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SwinTransformerBlock(dim=dim, |
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num_heads=num_heads, |
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window_size=window_size, |
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shift_size=0 if |
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(i % 2 == 0) else window_size // 2, |
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mlp_ratio=mlp_ratio, |
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qkv_bias=qkv_bias, |
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qk_scale=qk_scale, |
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drop=drop, |
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attn_drop=attn_drop, |
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drop_path=drop_path[i] if isinstance( |
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drop_path, list) else drop_path, |
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norm_layer=norm_layer) for i in range(depth) |
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]) |
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|
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if downsample is not None: |
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self.downsample = downsample(dim=dim, norm_layer=norm_layer) |
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else: |
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self.downsample = None |
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|
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def forward(self, x, H, W): |
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""" Forward function. |
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Args: |
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x: Input feature, tensor size (B, H*W, C). |
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H, W: Spatial resolution of the input feature. |
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""" |
|
|
|
|
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Hp = int(np.ceil(H / self.window_size)) * self.window_size |
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Wp = int(np.ceil(W / self.window_size)) * self.window_size |
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img_mask = torch.zeros((1, Hp, Wp, 1), device=x.device) |
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h_slices = (slice(0, -self.window_size), |
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slice(-self.window_size, |
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-self.shift_size), slice(-self.shift_size, None)) |
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w_slices = (slice(0, -self.window_size), |
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slice(-self.window_size, |
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-self.shift_size), slice(-self.shift_size, None)) |
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cnt = 0 |
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for h in h_slices: |
|
for w in w_slices: |
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img_mask[:, h, w, :] = cnt |
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cnt += 1 |
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|
|
mask_windows = window_partition( |
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img_mask, self.window_size) |
|
mask_windows = mask_windows.view(-1, |
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self.window_size * self.window_size) |
|
attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2) |
|
attn_mask = attn_mask.masked_fill(attn_mask != 0, |
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float(-100.0)).masked_fill( |
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attn_mask == 0, float(0.0)) |
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|
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for blk in self.blocks: |
|
blk.H, blk.W = H, W |
|
if self.use_checkpoint: |
|
x = checkpoint.checkpoint(blk, x, attn_mask) |
|
else: |
|
x = blk(x, attn_mask) |
|
if self.downsample is not None: |
|
x_down = self.downsample(x, H, W) |
|
Wh, Ww = (H + 1) // 2, (W + 1) // 2 |
|
return x, H, W, x_down, Wh, Ww |
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else: |
|
return x, H, W, x, H, W |
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|
|
|
|
class PatchEmbed(nn.Module): |
|
""" Image to Patch Embedding |
|
Args: |
|
patch_size (int): Patch token size. Default: 4. |
|
in_chans (int): Number of input image channels. Default: 3. |
|
embed_dim (int): Number of linear projection output channels. Default: 96. |
|
norm_layer (nn.Module, optional): Normalization layer. Default: None |
|
""" |
|
def __init__(self, |
|
patch_size=4, |
|
in_chans=3, |
|
embed_dim=96, |
|
norm_layer=None): |
|
super().__init__() |
|
patch_size = to_2tuple(patch_size) |
|
self.patch_size = patch_size |
|
|
|
self.in_chans = in_chans |
|
self.embed_dim = embed_dim |
|
|
|
self.proj = nn.Conv2d(in_chans, |
|
embed_dim, |
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kernel_size=patch_size, |
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stride=patch_size) |
|
if norm_layer is not None: |
|
self.norm = norm_layer(embed_dim) |
|
else: |
|
self.norm = None |
|
|
|
def forward(self, x): |
|
"""Forward function.""" |
|
|
|
_, _, H, W = x.size() |
|
if W % self.patch_size[1] != 0: |
|
x = F.pad(x, (0, self.patch_size[1] - W % self.patch_size[1])) |
|
if H % self.patch_size[0] != 0: |
|
x = F.pad(x, |
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(0, 0, 0, self.patch_size[0] - H % self.patch_size[0])) |
|
|
|
x = self.proj(x) |
|
if self.norm is not None: |
|
Wh, Ww = x.size(2), x.size(3) |
|
x = x.flatten(2).transpose(1, 2) |
|
x = self.norm(x) |
|
x = x.transpose(1, 2).view(-1, self.embed_dim, Wh, Ww) |
|
|
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return x |
|
|
|
|
|
class SwinTransformer(nn.Module): |
|
""" Swin Transformer backbone. |
|
A PyTorch impl of : `Swin Transformer: Hierarchical Vision Transformer using Shifted Windows` - |
|
https://arxiv.org/pdf/2103.14030 |
|
Args: |
|
pretrain_img_size (int): Input image size for training the pretrained model, |
|
used in absolute postion embedding. Default 224. |
|
patch_size (int | tuple(int)): Patch size. Default: 4. |
|
in_chans (int): Number of input image channels. Default: 3. |
|
embed_dim (int): Number of linear projection output channels. Default: 96. |
|
depths (tuple[int]): Depths of each Swin Transformer stage. |
|
num_heads (tuple[int]): Number of attention head of each stage. |
|
window_size (int): Window size. Default: 7. |
|
mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. Default: 4. |
|
qkv_bias (bool): If True, add a learnable bias to query, key, value. Default: True |
|
qk_scale (float): Override default qk scale of head_dim ** -0.5 if set. |
|
drop_rate (float): Dropout rate. |
|
attn_drop_rate (float): Attention dropout rate. Default: 0. |
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drop_path_rate (float): Stochastic depth rate. Default: 0.2. |
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norm_layer (nn.Module): Normalization layer. Default: nn.LayerNorm. |
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ape (bool): If True, add absolute position embedding to the patch embedding. Default: False. |
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patch_norm (bool): If True, add normalization after patch embedding. Default: True. |
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out_indices (Sequence[int]): Output from which stages. |
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frozen_stages (int): Stages to be frozen (stop grad and set eval mode). |
|
-1 means not freezing any parameters. |
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use_checkpoint (bool): Whether to use checkpointing to save memory. Default: False. |
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""" |
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def __init__(self, |
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pretrain_img_size=224, |
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patch_size=4, |
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in_chans=3, |
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embed_dim=96, |
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depths=[2, 2, 6, 2], |
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num_heads=[3, 6, 12, 24], |
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window_size=7, |
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mlp_ratio=4., |
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qkv_bias=True, |
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qk_scale=None, |
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drop_rate=0., |
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attn_drop_rate=0., |
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drop_path_rate=0.2, |
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norm_layer=nn.LayerNorm, |
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ape=False, |
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patch_norm=True, |
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out_indices=(0, 1, 2), |
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frozen_stages=-1, |
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use_checkpoint=False): |
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super().__init__() |
|
|
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self.pretrain_img_size = pretrain_img_size |
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self.num_layers = len(depths) - 1 |
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self.embed_dim = embed_dim |
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self.ape = ape |
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self.patch_norm = patch_norm |
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self.out_indices = out_indices |
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self.frozen_stages = frozen_stages |
|
|
|
|
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self.patch_embed = PatchEmbed( |
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patch_size=patch_size, |
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in_chans=in_chans, |
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embed_dim=embed_dim, |
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norm_layer=norm_layer if self.patch_norm else None) |
|
|
|
|
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if self.ape: |
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pretrain_img_size = to_2tuple(pretrain_img_size) |
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patch_size = to_2tuple(patch_size) |
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patches_resolution = [ |
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pretrain_img_size[0] // patch_size[0], |
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pretrain_img_size[1] // patch_size[1] |
|
] |
|
|
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self.absolute_pos_embed = nn.Parameter( |
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torch.zeros(1, embed_dim, patches_resolution[0], |
|
patches_resolution[1])) |
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trunc_normal_(self.absolute_pos_embed, std=.02) |
|
|
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self.pos_drop = nn.Dropout(p=drop_rate) |
|
|
|
|
|
dpr = [ |
|
x.item() for x in torch.linspace(0, drop_path_rate, sum(depths)) |
|
] |
|
|
|
|
|
self.layers = nn.ModuleList() |
|
for i_layer in range(self.num_layers): |
|
layer = BasicLayer( |
|
dim=int(embed_dim * 2**i_layer), |
|
depth=depths[i_layer], |
|
num_heads=num_heads[i_layer], |
|
window_size=window_size, |
|
mlp_ratio=mlp_ratio, |
|
qkv_bias=qkv_bias, |
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qk_scale=qk_scale, |
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drop=drop_rate, |
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attn_drop=attn_drop_rate, |
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drop_path=dpr[sum(depths[:i_layer]):sum(depths[:i_layer + 1])], |
|
norm_layer=norm_layer, |
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downsample=PatchMerging if |
|
(i_layer < self.num_layers - 1) else None, |
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use_checkpoint=use_checkpoint) |
|
self.layers.append(layer) |
|
|
|
num_features = [int(embed_dim * 2**i) for i in range(self.num_layers)] |
|
self.num_features = num_features |
|
|
|
|
|
for i_layer in out_indices: |
|
layer = norm_layer(num_features[i_layer]) |
|
layer_name = f'norm{i_layer}' |
|
self.add_module(layer_name, layer) |
|
|
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self._freeze_stages() |
|
|
|
def _freeze_stages(self): |
|
if self.frozen_stages >= 0: |
|
self.patch_embed.eval() |
|
for param in self.patch_embed.parameters(): |
|
param.requires_grad = False |
|
|
|
if self.frozen_stages >= 1 and self.ape: |
|
self.absolute_pos_embed.requires_grad = False |
|
|
|
if self.frozen_stages >= 2: |
|
self.pos_drop = nn.Identity() |
|
for i in range(0, self.frozen_stages - 1): |
|
m = self.layers[i] |
|
for block in m.blocks: |
|
block.drop_path = nn.Identity() |
|
block.attn.attn_drop = nn.Identity() |
|
block.attn.proj_drop = nn.Identity() |
|
for param in m.parameters(): |
|
param.requires_grad = False |
|
if m.downsample is not None: |
|
for param in m.downsample.parameters(): |
|
param.requires_grad = True |
|
|
|
def init_weights(self, pretrained=None): |
|
"""Initialize the weights in backbone. |
|
Args: |
|
pretrained (str, optional): Path to pre-trained weights. |
|
Defaults to None. |
|
""" |
|
def _init_weights(m): |
|
if isinstance(m, nn.Linear): |
|
trunc_normal_(m.weight, std=.02) |
|
if isinstance(m, nn.Linear) and m.bias is not None: |
|
nn.init.constant_(m.bias, 0) |
|
elif isinstance(m, nn.LayerNorm): |
|
nn.init.constant_(m.bias, 0) |
|
nn.init.constant_(m.weight, 1.0) |
|
|
|
if isinstance(pretrained, str): |
|
self.apply(_init_weights) |
|
|
|
|
|
elif pretrained is None: |
|
self.apply(_init_weights) |
|
else: |
|
raise TypeError('pretrained must be a str or None') |
|
|
|
def forward(self, x): |
|
"""Forward function.""" |
|
x = self.patch_embed(x) |
|
|
|
Wh, Ww = x.size(2), x.size(3) |
|
if self.ape: |
|
|
|
absolute_pos_embed = F.interpolate(self.absolute_pos_embed, |
|
size=(Wh, Ww), |
|
mode='bicubic') |
|
x = (x + absolute_pos_embed).flatten(2).transpose(1, |
|
2) |
|
else: |
|
x = x.flatten(2).transpose(1, 2) |
|
x = self.pos_drop(x) |
|
|
|
outs = [] |
|
for i in range(self.num_layers): |
|
layer = self.layers[i] |
|
x_out, H, W, x, Wh, Ww = layer(x, Wh, Ww) |
|
|
|
if i in self.out_indices: |
|
norm_layer = getattr(self, f'norm{i}') |
|
x_out = norm_layer(x_out) |
|
|
|
out = x_out.view(-1, H, W, |
|
self.num_features[i]).permute(0, 3, 1, |
|
2).contiguous() |
|
outs.append(out) |
|
|
|
outs.append(outs[-1]) |
|
|
|
return outs |
|
|