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Browse files- adata.h5ad +1 -1
- lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733435405.Yoseflab-R13B.337477.9 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437295.Yoseflab-R13B.337477.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437668.Yoseflab-R13B.337477.29 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733438915.Yoseflab-R13B.337477.37 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733440288.Yoseflab-R13B.337477.53 +3 -0
- lightning_logs/version_0/hparams.yaml +1 -0
- lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0 +3 -0
- lightning_logs/version_1/hparams.yaml +1 -0
- lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1 +3 -0
- lightning_logs/version_2/hparams.yaml +1 -0
- metrics.json +3 -3
- model.pt +1 -1
adata.h5ad
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lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25
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lightning_logs/version_0/events.out.tfevents.1733435405.Yoseflab-R13B.337477.9
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lightning_logs/version_0/events.out.tfevents.1733437295.Yoseflab-R13B.337477.25
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lightning_logs/version_0/events.out.tfevents.1733437668.Yoseflab-R13B.337477.29
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lightning_logs/version_0/events.out.tfevents.1733438915.Yoseflab-R13B.337477.37
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lightning_logs/version_0/events.out.tfevents.1733440288.Yoseflab-R13B.337477.53
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lightning_logs/version_0/hparams.yaml
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{}
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lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0
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lightning_logs/version_1/hparams.yaml
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lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1
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lightning_logs/version_2/hparams.yaml
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metrics.json
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"cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.
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"gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 5.
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"diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive, alpha-beta T cell | 0.
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"cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.85 | 2.17 |\n| Pearson Correlation | 0.93 | 0.90 |\n| Spearman Correlation | 0.92 | 0.89 |\n| R\u00b2 (R-Squared) | 0.84 | 0.76 |",
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"gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 5.38 |\n| Pearson Correlation | 0.91 |\n| Spearman Correlation | 0.97 |\n| R\u00b2 (R-Squared) | 0.64 |",
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"diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive, alpha-beta T cell | 0.95 | 3.15 | 0.54 | 0.62 | 0.21 | 0.79 | 2872.00 |\n| enterocyte of epithelium of large intestine | 0.93 | 2.89 | 0.51 | 0.80 | 0.23 | 0.77 | 2764.00 |\n| CD8-positive, alpha-beta T cell | 0.95 | 3.47 | 0.60 | 0.68 | 0.23 | 0.80 | 2105.00 |\n| fibroblast | 0.95 | 3.26 | 0.67 | 0.83 | 0.52 | 0.89 | 852.00 |\n| paneth cell of colon | 0.95 | 3.71 | 0.61 | 0.72 | 0.29 | 0.81 | 831.00 |\n| monocyte | 0.94 | 3.87 | 0.68 | 0.76 | 0.39 | 0.86 | 543.00 |\n| B cell | 0.93 | 4.26 | 0.61 | 0.62 | 0.28 | 0.79 | 469.00 |\n| large intestine goblet cell | 0.87 | 4.45 | 0.58 | 0.65 | 0.33 | 0.76 | 385.00 |\n| plasma cell | 0.89 | 4.12 | 0.63 | 0.68 | 0.24 | 0.84 | 330.00 |\n| intestinal crypt stem cell of large intestine | 0.89 | 5.03 | 0.56 | 0.58 | 0.32 | 0.75 | 114.00 |\n| transit amplifying cell of colon | 0.64 | 4.66 | 0.58 | 0.58 | 0.29 | 0.71 | 52.00 |\n| mast cell | 0.80 | 5.20 | 0.53 | 0.48 | 0.39 | 0.80 | 38.00 |\n| gut endothelial cell | 0.71 | 5.06 | 0.61 | 0.60 | 0.42 | 0.79 | 31.00 |\n| neutrophil | 0.66 | 4.12 | 0.68 | 0.67 | 0.36 | 0.79 | 22.00 |\n| intestinal enteroendocrine cell | 0.68 | 4.71 | 0.62 | 0.61 | 0.32 | 0.74 | 19.00 |\n| intestinal tuft cell | 0.66 | 5.60 | 0.47 | 0.44 | 0.32 | 0.77 | 12.00 |"
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}
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model.pt
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