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adata.h5ad

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metrics.json

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 {
-    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.68  | 1.70           |\n| Pearson Correlation | 0.94  | 0.94  |\n| Spearman Correlation | 0.93 | 0.93  |\n| R\u00b2 (R-Squared) | 0.87  | 0.87      |",
-    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 5.54   |\n| Pearson Correlation | 0.92  |\n| Spearman Correlation | 0.98 |\n| R\u00b2 (R-Squared) | 0.60  |",
-    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive, alpha-beta T cell | 0.96 | 2.89 | 0.59 | 0.67 | 0.20 | 0.78 | 2872.00 |\n| enterocyte of epithelium of large intestine | 0.96 | 2.58 | 0.56 | 0.82 | 0.23 | 0.77 | 2764.00 |\n| CD8-positive, alpha-beta T cell | 0.93 | 3.54 | 0.60 | 0.69 | 0.22 | 0.80 | 2105.00 |\n| fibroblast | 0.96 | 2.77 | 0.74 | 0.87 | 0.50 | 0.88 | 852.00 |\n| paneth cell of colon | 0.96 | 3.67 | 0.62 | 0.72 | 0.29 | 0.81 | 831.00 |\n| monocyte | 0.94 | 3.53 | 0.72 | 0.80 | 0.38 | 0.86 | 543.00 |\n| B cell | 0.94 | 3.87 | 0.66 | 0.67 | 0.26 | 0.79 | 469.00 |\n| large intestine goblet cell | 0.90 | 4.22 | 0.61 | 0.68 | 0.32 | 0.76 | 385.00 |\n| plasma cell | 0.94 | 3.73 | 0.68 | 0.72 | 0.25 | 0.84 | 330.00 |\n| intestinal crypt stem cell of large intestine | 0.84 | 4.85 | 0.58 | 0.60 | 0.30 | 0.74 | 114.00 |\n| transit amplifying cell of colon | 0.72 | 4.96 | 0.56 | 0.55 | 0.29 | 0.72 | 52.00 |\n| mast cell | 0.83 | 4.62 | 0.58 | 0.55 | 0.36 | 0.79 | 38.00 |\n| gut endothelial cell | 0.72 | 4.72 | 0.65 | 0.64 | 0.38 | 0.77 | 31.00 |\n| neutrophil | 0.69 | 4.21 | 0.68 | 0.67 | 0.34 | 0.78 | 22.00 |\n| intestinal enteroendocrine cell | 0.70 | 4.49 | 0.64 | 0.62 | 0.32 | 0.74 | 19.00 |\n| intestinal tuft cell | 0.69 | 4.94 | 0.50 | 0.49 | 0.33 | 0.78 | 12.00 |"
+    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.69  | 1.66           |\n| Pearson Correlation | 0.94  | 0.94  |\n| Spearman Correlation | 0.93 | 0.93  |\n| R\u00b2 (R-Squared) | 0.87  | 0.88      |",
+    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 5.33   |\n| Pearson Correlation | 0.92  |\n| Spearman Correlation | 0.98 |\n| R\u00b2 (R-Squared) | 0.64  |",
+    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive, alpha-beta T cell | 0.94 | 2.86 | 0.59 | 0.68 | 0.20 | 0.78 | 2872.00 |\n| enterocyte of epithelium of large intestine | 0.95 | 2.46 | 0.59 | 0.84 | 0.23 | 0.77 | 2764.00 |\n| CD8-positive, alpha-beta T cell | 0.94 | 3.49 | 0.60 | 0.68 | 0.23 | 0.80 | 2105.00 |\n| fibroblast | 0.92 | 2.91 | 0.71 | 0.86 | 0.51 | 0.89 | 852.00 |\n| paneth cell of colon | 0.95 | 3.53 | 0.63 | 0.73 | 0.29 | 0.81 | 831.00 |\n| monocyte | 0.92 | 3.62 | 0.71 | 0.79 | 0.38 | 0.86 | 543.00 |\n| B cell | 0.94 | 4.38 | 0.60 | 0.62 | 0.29 | 0.80 | 469.00 |\n| large intestine goblet cell | 0.87 | 4.21 | 0.61 | 0.67 | 0.33 | 0.76 | 385.00 |\n| plasma cell | 0.93 | 3.68 | 0.68 | 0.72 | 0.24 | 0.84 | 330.00 |\n| intestinal crypt stem cell of large intestine | 0.83 | 5.03 | 0.57 | 0.59 | 0.30 | 0.74 | 114.00 |\n| transit amplifying cell of colon | 0.69 | 4.71 | 0.59 | 0.58 | 0.30 | 0.71 | 52.00 |\n| mast cell | 0.84 | 4.86 | 0.55 | 0.52 | 0.35 | 0.79 | 38.00 |\n| gut endothelial cell | 0.74 | 4.81 | 0.65 | 0.64 | 0.39 | 0.78 | 31.00 |\n| neutrophil | 0.68 | 4.14 | 0.69 | 0.66 | 0.35 | 0.79 | 22.00 |\n| intestinal enteroendocrine cell | 0.70 | 4.38 | 0.64 | 0.63 | 0.31 | 0.74 | 19.00 |\n| intestinal tuft cell | 0.65 | 4.74 | 0.52 | 0.50 | 0.32 | 0.77 | 12.00 |"
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model.pt

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