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Upload metadata.json with huggingface_hub

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  1. metadata.json +35 -0
metadata.json ADDED
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+ {
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+ "popv_version": "0.5.0",
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+ "anndata_version": "0.11.1",
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+ "setup_dict": {
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+ "ref_labels_key": "popv_labels",
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+ "ref_batch_key": "batch_key",
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+ "unknown_celltype_label": "unassigned"
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+ },
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+ "prediction_keys": [
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+ "popv_celltypist_prediction",
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+ "popv_knn_bbknn_prediction",
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+ "popv_knn_harmony_prediction",
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+ "popv_knn_on_scvi_prediction",
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+ "popv_onclass_prediction",
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+ "popv_scanvi_prediction",
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+ "popv_svm_prediction",
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+ "popv_xgboost_prediction"
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+ ],
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+ "method_kwargs": {
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+ "svm": {
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+ "train_both": true
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+ }
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+ },
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+ "methods": [
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+ "CELLTYPIST",
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+ "KNN_BBKNN",
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+ "KNN_HARMONY",
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+ "KNN_SCVI",
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+ "ONCLASS",
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+ "SCANVI_POPV",
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+ "Support_Vector",
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+ "XGboost"
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+ ],
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+ "cellxgene_url": "https://cellxgene.cziscience.com/e/5a11f879-d1ef-458a-910c-9b0bdfca5ebf.cxg/"
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+ }