Datasets:
AlbericDeLajarte
commited on
Commit
•
fe896df
1
Parent(s):
096b0fa
Removed multiple chains from PDB data
Browse filesThis view is limited to 50 files because it contains too many changes.
See raw diff
- README.md +5 -5
- data.json +0 -0
- info.json +2 -2
- source/bpSEQ_files_pdbee/17RA-2D.bpseq +21 -0
- source/bpSEQ_files_pdbee/1A51-2D.bpseq +41 -0
- source/bpSEQ_files_pdbee/1A60-2D.bpseq +44 -0
- source/bpSEQ_files_pdbee/1A9L-2D.bpseq +38 -0
- source/bpSEQ_files_pdbee/1AFX-2D.bpseq +12 -0
- source/bpSEQ_files_pdbee/1ANR-2D.bpseq +29 -0
- source/bpSEQ_files_pdbee/1AQO-2D.bpseq +29 -0
- source/bpSEQ_files_pdbee/1ATO-2D.bpseq +19 -0
- source/bpSEQ_files_pdbee/1ATV-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1ATW-2D.bpseq +15 -0
- source/bpSEQ_files_pdbee/1B36-2D.bpseq +38 -0
- source/bpSEQ_files_pdbee/1BGZ-2D.bpseq +23 -0
- source/bpSEQ_files_pdbee/1BN0-2D.bpseq +20 -0
- source/bpSEQ_files_pdbee/1BVJ-2D.bpseq +23 -0
- source/bpSEQ_files_pdbee/1BZ2-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1BZ3-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1BZT-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1BZU-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1C2W-2D.bpseq +2904 -0
- source/bpSEQ_files_pdbee/1C2X-2D.bpseq +120 -0
- source/bpSEQ_files_pdbee/1CQ5-2D.bpseq +43 -0
- source/bpSEQ_files_pdbee/1CQL-2D.bpseq +43 -0
- source/bpSEQ_files_pdbee/1D0T-2D.bpseq +21 -0
- source/bpSEQ_files_pdbee/1D0U-2D.bpseq +21 -0
- source/bpSEQ_files_pdbee/1E4P-2D.bpseq +24 -0
- source/bpSEQ_files_pdbee/1E95-2D.bpseq +36 -0
- source/bpSEQ_files_pdbee/1EBQ-2D.bpseq +29 -0
- source/bpSEQ_files_pdbee/1EBR-2D.bpseq +30 -0
- source/bpSEQ_files_pdbee/1EBS-2D.bpseq +29 -0
- source/bpSEQ_files_pdbee/1ESH-2D.bpseq +13 -0
- source/bpSEQ_files_pdbee/1ESY-2D.bpseq +19 -0
- source/bpSEQ_files_pdbee/1F6X-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1F6Z-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1F7F-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1F7G-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1F84-2D.bpseq +29 -0
- source/bpSEQ_files_pdbee/1F85-2D.bpseq +14 -0
- source/bpSEQ_files_pdbee/1F9L-2D.bpseq +22 -0
- source/bpSEQ_files_pdbee/1FEQ-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1FHK-2D.bpseq +14 -0
- source/bpSEQ_files_pdbee/1FL8-2D.bpseq +17 -0
- source/bpSEQ_files_pdbee/1FQZ-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1FYO-2D.bpseq +27 -0
- source/bpSEQ_files_pdbee/1HLX-2D.bpseq +20 -0
- source/bpSEQ_files_pdbee/1HS1-2D.bpseq +13 -0
- source/bpSEQ_files_pdbee/1HS2-2D.bpseq +13 -0
- source/bpSEQ_files_pdbee/1HS3-2D.bpseq +13 -0
README.md
CHANGED
@@ -11,7 +11,7 @@ pretty_name: PDB
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---
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# PDB
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-
upload_date: 2023-12-
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user: alberic
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source: `bpSEQ_files_pdbee` (BPSEQ files format)
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@@ -19,9 +19,9 @@ pretty_name: PDB
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- structure (Read from source.)
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Filtering report:
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-
Over a total of
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-
-
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- 0 invalid datapoints (ex: sequence with non-regular characters)
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- 0 datapoints with the same reference
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-
-
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-
-
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---
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# PDB
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+
upload_date: 2023-12-06 13:27:53
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user: alberic
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source: `bpSEQ_files_pdbee` (BPSEQ files format)
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- structure (Read from source.)
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Filtering report:
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+
Over a total of 443 datapoints, there are:
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+
- 334 valid datapoints
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- 0 invalid datapoints (ex: sequence with non-regular characters)
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- 0 datapoints with the same reference
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+
- 50 duplicate sequences with the same structure / dms
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+
- 59 duplicate sequences with different structure / dms
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data.json
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The diff for this file is too large to render.
See raw diff
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info.json
CHANGED
@@ -1,9 +1,9 @@
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{
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"name": "PDB",
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-
"upload_date": "2023-12-
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"user": "alberic",
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"source": "`bpSEQ_files_pdbee` (BPSEQ files format)",
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"structure": "source",
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"about structure": "Read from source.",
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-
"filtering_report": "Over a total of
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}
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{
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"name": "PDB",
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+
"upload_date": "2023-12-06 13:27:53",
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"user": "alberic",
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"source": "`bpSEQ_files_pdbee` (BPSEQ files format)",
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"structure": "source",
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"about structure": "Read from source.",
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+
"filtering_report": "Over a total of 443 datapoints, there are:\n - 334 valid datapoints\n - 0 invalid datapoints (ex: sequence with non-regular characters)\n - 0 datapoints with the same reference\n - 50 duplicate sequences with the same structure / dms\n - 59 duplicate sequences with different structure / dms"
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}
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source/bpSEQ_files_pdbee/17RA-2D.bpseq
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@@ -0,0 +1,21 @@
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1 g 21
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2 G 20
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3 C 19
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4 G 18
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5 U 17
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6 A 0
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7 A 0
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8 G 15
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9 G 14
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10 A 0
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11 U 0
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12 U 0
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13 A 0
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+
14 C 9
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15 C 8
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+
16 U 0
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17 A 5
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18 U 4
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19 G 3
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20 C 2
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21 C 1
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source/bpSEQ_files_pdbee/1A51-2D.bpseq
ADDED
@@ -0,0 +1,41 @@
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1 g 41
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2 G 40
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3 C 39
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4 C 38
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5 G 0
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6 A 0
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7 U 0
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8 G 0
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9 G 0
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10 U 0
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11 A 0
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12 G 30
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13 U 29
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14 G 28
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15 U 27
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16 G 26
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17 G 25
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18 G 24
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19 G 23
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20 U 0
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21 C 0
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22 U 0
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23 C 19
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24 C 18
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25 C 17
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26 C 16
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27 A 15
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28 U 14
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29 G 13
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30 C 12
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31 G 0
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32 A 0
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33 G 0
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34 A 0
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35 G 0
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36 U 0
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37 A 0
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38 G 4
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39 G 3
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40 C 2
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41 C 1
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source/bpSEQ_files_pdbee/1A60-2D.bpseq
ADDED
@@ -0,0 +1,44 @@
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+
1 g 17
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2 G 16
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3 G 15
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+
4 A 14
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+
5 G 13
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6 |
+
6 C 0
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+
7 U 0
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8 |
+
8 C 0
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9 |
+
9 A 0
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10 |
+
10 A 0
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+
11 C 0
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+
12 U 0
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+
13 C 5
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+
14 U 4
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+
15 C 3
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+
16 C 2
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+
17 C 1
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+
18 C 32
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+
19 C 31
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+
20 C 30
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+
21 C 0
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+
22 U 0
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+
23 U 0
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+
24 U 41
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+
25 U 40
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+
26 C 39
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+
27 C 38
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+
28 G 37
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+
29 A 36
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30 G 20
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+
31 G 19
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+
32 G 18
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+
33 U 0
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+
34 C 0
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+
35 A 0
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+
36 U 29
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+
37 C 28
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38 G 27
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39 G 26
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40 A 25
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41 A 24
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+
42 C 0
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+
43 C 0
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44 A 0
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source/bpSEQ_files_pdbee/1A9L-2D.bpseq
ADDED
@@ -0,0 +1,38 @@
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1 g 38
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2 G 37
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3 G 36
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4 U 35
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5 G 34
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6 A 33
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7 C 29
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8 U 28
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9 C 27
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10 C 26
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11 A 0
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12 G 0
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13 A 0
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14 G 25
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15 G 24
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16 U 23
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17 C 22
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18 G 0
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19 A 0
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20 G 0
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21 A 0
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22 G 17
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23 A 16
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24 C 15
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25 C 14
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26 G 10
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27 G 9
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28 A 8
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29 G 7
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30 A 0
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31 U 0
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32 A 0
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33 U 6
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34 C 5
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35 A 4
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36 C 3
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37 C 2
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38 C 1
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source/bpSEQ_files_pdbee/1AFX-2D.bpseq
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1 g 12
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2 G 11
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3 U 10
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4 G 9
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5 U 0
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6 G 0
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7 A 0
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8 A 0
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9 C 4
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10 A 3
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11 C 2
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12 C 1
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source/bpSEQ_files_pdbee/1ANR-2D.bpseq
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2 G 28
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3 C 27
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4 A 26
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5 G 25
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6 A 0
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7 U 0
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8 C 0
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9 U 0
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10 G 23
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11 A 22
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12 G 21
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13 C 20
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14 C 0
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15 U 0
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16 G 0
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17 G 0
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18 G 0
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19 A 0
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20 G 13
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21 C 12
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22 U 11
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23 C 10
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24 U 0
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25 C 5
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26 U 4
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27 G 3
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28 C 2
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29 C 1
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source/bpSEQ_files_pdbee/1AQO-2D.bpseq
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1 g 29
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2 G 28
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3 A 27
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4 G 26
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5 U 25
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6 G 24
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7 C 0
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8 U 23
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9 U 22
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10 C 21
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11 A 20
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12 A 19
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13 C 17
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14 A 0
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15 G 0
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16 U 0
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17 G 13
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18 C 0
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19 U 12
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20 U 11
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21 G 10
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22 G 9
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23 A 8
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24 C 6
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25 G 5
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26 C 4
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27 U 3
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28 C 2
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29 C 1
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source/bpSEQ_files_pdbee/1ATO-2D.bpseq
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1 g 19
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3 C 17
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4 A 16
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5 C 15
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6 C 14
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7 U 0
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8 C 0
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9 C 0
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10 U 0
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11 C 0
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12 G 0
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13 C 0
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14 G 6
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15 G 5
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16 U 4
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17 G 3
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18 C 2
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19 C 1
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source/bpSEQ_files_pdbee/1ATV-2D.bpseq
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2 G 15
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3 G 14
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4 A 13
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5 C 12
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6 C 11
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7 A 0
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8 G 0
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11 G 6
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12 G 5
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13 U 4
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14 C 3
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15 C 2
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16 C 1
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17 G 0
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source/bpSEQ_files_pdbee/1ATW-2D.bpseq
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|
|
1 |
+
1 g 14
|
2 |
+
2 C 13
|
3 |
+
3 U 12
|
4 |
+
4 C 11
|
5 |
+
5 C 10
|
6 |
+
6 A 0
|
7 |
+
7 G 0
|
8 |
+
8 A 0
|
9 |
+
9 U 0
|
10 |
+
10 G 5
|
11 |
+
11 G 4
|
12 |
+
12 A 3
|
13 |
+
13 G 2
|
14 |
+
14 C 1
|
15 |
+
15 G 0
|
source/bpSEQ_files_pdbee/1B36-2D.bpseq
ADDED
@@ -0,0 +1,38 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 38
|
2 |
+
2 G 37
|
3 |
+
3 U 36
|
4 |
+
4 G 35
|
5 |
+
5 C 34
|
6 |
+
6 A 0
|
7 |
+
7 G 0
|
8 |
+
8 A 0
|
9 |
+
9 A 0
|
10 |
+
10 A 0
|
11 |
+
11 C 0
|
12 |
+
12 A 0
|
13 |
+
13 G 24
|
14 |
+
14 C 23
|
15 |
+
15 G 22
|
16 |
+
16 C 21
|
17 |
+
17 U 0
|
18 |
+
18 U 0
|
19 |
+
19 C 0
|
20 |
+
20 G 0
|
21 |
+
21 G 16
|
22 |
+
22 C 15
|
23 |
+
23 G 14
|
24 |
+
24 C 13
|
25 |
+
25 G 0
|
26 |
+
26 U 0
|
27 |
+
27 A 0
|
28 |
+
28 U 0
|
29 |
+
29 A 0
|
30 |
+
30 U 0
|
31 |
+
31 U 0
|
32 |
+
32 A 0
|
33 |
+
33 C 0
|
34 |
+
34 G 5
|
35 |
+
35 C 4
|
36 |
+
36 A 3
|
37 |
+
37 C 2
|
38 |
+
38 C 1
|
source/bpSEQ_files_pdbee/1BGZ-2D.bpseq
ADDED
@@ -0,0 +1,23 @@
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 23
|
2 |
+
2 G 22
|
3 |
+
3 G 21
|
4 |
+
4 A 20
|
5 |
+
5 U 0
|
6 |
+
6 A 0
|
7 |
+
7 C 19
|
8 |
+
8 U 18
|
9 |
+
9 G 16
|
10 |
+
10 C 15
|
11 |
+
11 U 0
|
12 |
+
12 U 0
|
13 |
+
13 C 0
|
14 |
+
14 G 0
|
15 |
+
15 G 10
|
16 |
+
16 U 9
|
17 |
+
17 A 0
|
18 |
+
18 A 8
|
19 |
+
19 G 7
|
20 |
+
20 U 4
|
21 |
+
21 C 3
|
22 |
+
22 C 2
|
23 |
+
23 C 1
|
source/bpSEQ_files_pdbee/1BN0-2D.bpseq
ADDED
@@ -0,0 +1,20 @@
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 20
|
2 |
+
2 G 19
|
3 |
+
3 A 18
|
4 |
+
4 C 17
|
5 |
+
5 U 16
|
6 |
+
6 A 15
|
7 |
+
7 G 14
|
8 |
+
8 C 13
|
9 |
+
9 G 0
|
10 |
+
10 G 0
|
11 |
+
11 A 0
|
12 |
+
12 G 0
|
13 |
+
13 G 8
|
14 |
+
14 C 7
|
15 |
+
15 U 6
|
16 |
+
16 A 5
|
17 |
+
17 G 4
|
18 |
+
18 U 3
|
19 |
+
19 C 2
|
20 |
+
20 C 1
|
source/bpSEQ_files_pdbee/1BVJ-2D.bpseq
ADDED
@@ -0,0 +1,23 @@
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 G 23
|
2 |
+
2 G 22
|
3 |
+
3 C 21
|
4 |
+
4 G 20
|
5 |
+
5 A 19
|
6 |
+
6 C 0
|
7 |
+
7 G 18
|
8 |
+
8 G 17
|
9 |
+
9 U 16
|
10 |
+
10 G 0
|
11 |
+
11 U 0
|
12 |
+
12 A 0
|
13 |
+
13 A 0
|
14 |
+
14 A 0
|
15 |
+
15 A 0
|
16 |
+
16 A 9
|
17 |
+
17 U 8
|
18 |
+
18 C 7
|
19 |
+
19 U 5
|
20 |
+
20 C 4
|
21 |
+
21 G 3
|
22 |
+
22 C 2
|
23 |
+
23 C 1
|
source/bpSEQ_files_pdbee/1BZ2-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 13
|
6 |
+
6 C 0
|
7 |
+
7 U 0
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 A 0
|
12 |
+
12 A 0
|
13 |
+
13 U 5
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 A 1
|
source/bpSEQ_files_pdbee/1BZ3-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 13
|
6 |
+
6 C 0
|
7 |
+
7 U 11
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 A 7
|
12 |
+
12 A 0
|
13 |
+
13 U 5
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 A 1
|
source/bpSEQ_files_pdbee/1BZT-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
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|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 0
|
6 |
+
6 C 0
|
7 |
+
7 U 0
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 A 0
|
12 |
+
12 A 0
|
13 |
+
13 u 0
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 A 1
|
source/bpSEQ_files_pdbee/1BZU-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
|
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|
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|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 0
|
6 |
+
6 C 0
|
7 |
+
7 U 0
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 A 0
|
12 |
+
12 A 0
|
13 |
+
13 u 0
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 A 1
|
source/bpSEQ_files_pdbee/1C2W-2D.bpseq
ADDED
@@ -0,0 +1,2904 @@
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|
1 |
+
1 g 2902
|
2 |
+
2 G 2901
|
3 |
+
3 U 2900
|
4 |
+
4 U 2899
|
5 |
+
5 A 2898
|
6 |
+
6 A 2897
|
7 |
+
7 G 2896
|
8 |
+
8 C 2895
|
9 |
+
9 G 0
|
10 |
+
10 A 0
|
11 |
+
11 C 0
|
12 |
+
12 U 0
|
13 |
+
13 A 0
|
14 |
+
14 A 0
|
15 |
+
15 G 0
|
16 |
+
16 C 524
|
17 |
+
17 G 523
|
18 |
+
18 U 522
|
19 |
+
19 A 521
|
20 |
+
20 C 520
|
21 |
+
21 A 519
|
22 |
+
22 C 518
|
23 |
+
23 G 517
|
24 |
+
24 G 516
|
25 |
+
25 U 515
|
26 |
+
26 G 0
|
27 |
+
27 G 0
|
28 |
+
28 A 0
|
29 |
+
29 U 0
|
30 |
+
30 G 475
|
31 |
+
31 C 474
|
32 |
+
32 C 473
|
33 |
+
33 C 0
|
34 |
+
34 U 0
|
35 |
+
35 G 445
|
36 |
+
36 G 444
|
37 |
+
37 C 442
|
38 |
+
38 A 441
|
39 |
+
39 G 440
|
40 |
+
40 U 439
|
41 |
+
41 C 438
|
42 |
+
42 A 437
|
43 |
+
43 G 436
|
44 |
+
44 A 434
|
45 |
+
45 G 433
|
46 |
+
46 G 0
|
47 |
+
47 C 0
|
48 |
+
48 G 0
|
49 |
+
49 A 0
|
50 |
+
50 U 0
|
51 |
+
51 G 0
|
52 |
+
52 A 0
|
53 |
+
53 A 0
|
54 |
+
54 G 116
|
55 |
+
55 G 115
|
56 |
+
56 A 114
|
57 |
+
57 C 70
|
58 |
+
58 G 69
|
59 |
+
59 U 0
|
60 |
+
60 G 0
|
61 |
+
61 C 93
|
62 |
+
62 U 0
|
63 |
+
63 A 0
|
64 |
+
64 A 0
|
65 |
+
65 U 89
|
66 |
+
66 C 88
|
67 |
+
67 U 74
|
68 |
+
68 G 0
|
69 |
+
69 C 58
|
70 |
+
70 G 57
|
71 |
+
71 A 0
|
72 |
+
72 U 0
|
73 |
+
73 A 0
|
74 |
+
74 A 67
|
75 |
+
75 G 0
|
76 |
+
76 C 110
|
77 |
+
77 G 109
|
78 |
+
78 U 0
|
79 |
+
79 C 107
|
80 |
+
80 G 106
|
81 |
+
81 G 105
|
82 |
+
82 U 104
|
83 |
+
83 A 0
|
84 |
+
84 A 0
|
85 |
+
85 G 97
|
86 |
+
86 G 96
|
87 |
+
87 U 95
|
88 |
+
88 G 66
|
89 |
+
89 A 65
|
90 |
+
90 U 0
|
91 |
+
91 A 0
|
92 |
+
92 U 0
|
93 |
+
93 G 61
|
94 |
+
94 A 0
|
95 |
+
95 A 87
|
96 |
+
96 C 86
|
97 |
+
97 C 85
|
98 |
+
98 G 0
|
99 |
+
99 U 0
|
100 |
+
100 U 0
|
101 |
+
101 A 0
|
102 |
+
102 U 0
|
103 |
+
103 A 0
|
104 |
+
104 A 82
|
105 |
+
105 C 81
|
106 |
+
106 C 80
|
107 |
+
107 G 79
|
108 |
+
108 G 0
|
109 |
+
109 C 77
|
110 |
+
110 G 76
|
111 |
+
111 A 0
|
112 |
+
112 U 0
|
113 |
+
113 U 0
|
114 |
+
114 U 56
|
115 |
+
115 C 55
|
116 |
+
116 C 54
|
117 |
+
117 G 0
|
118 |
+
118 A 0
|
119 |
+
119 A 0
|
120 |
+
120 U 0
|
121 |
+
121 G 130
|
122 |
+
122 G 129
|
123 |
+
123 G 128
|
124 |
+
124 G 0
|
125 |
+
125 A 0
|
126 |
+
126 A 0
|
127 |
+
127 A 0
|
128 |
+
128 C 123
|
129 |
+
129 C 122
|
130 |
+
130 C 121
|
131 |
+
131 A 148
|
132 |
+
132 G 147
|
133 |
+
133 U 146
|
134 |
+
134 G 145
|
135 |
+
135 U 144
|
136 |
+
136 G 143
|
137 |
+
137 U 142
|
138 |
+
138 U 0
|
139 |
+
139 U 0
|
140 |
+
140 C 0
|
141 |
+
141 G 0
|
142 |
+
142 A 137
|
143 |
+
143 C 136
|
144 |
+
144 A 135
|
145 |
+
145 C 134
|
146 |
+
146 A 133
|
147 |
+
147 C 132
|
148 |
+
148 U 131
|
149 |
+
149 A 0
|
150 |
+
150 U 176
|
151 |
+
151 C 175
|
152 |
+
152 A 174
|
153 |
+
153 U 173
|
154 |
+
154 U 172
|
155 |
+
155 A 171
|
156 |
+
156 A 170
|
157 |
+
157 C 169
|
158 |
+
158 U 167
|
159 |
+
159 G 0
|
160 |
+
160 A 0
|
161 |
+
161 A 0
|
162 |
+
162 U 0
|
163 |
+
163 C 0
|
164 |
+
164 C 0
|
165 |
+
165 A 0
|
166 |
+
166 U 0
|
167 |
+
167 A 158
|
168 |
+
168 G 0
|
169 |
+
169 G 157
|
170 |
+
170 U 156
|
171 |
+
171 U 155
|
172 |
+
172 A 154
|
173 |
+
173 A 153
|
174 |
+
174 U 152
|
175 |
+
175 G 151
|
176 |
+
176 A 150
|
177 |
+
177 G 0
|
178 |
+
178 G 0
|
179 |
+
179 C 0
|
180 |
+
180 G 0
|
181 |
+
181 A 0
|
182 |
+
182 A 0
|
183 |
+
183 C 0
|
184 |
+
184 C 212
|
185 |
+
185 G 211
|
186 |
+
186 G 210
|
187 |
+
187 G 209
|
188 |
+
188 G 208
|
189 |
+
189 G 0
|
190 |
+
190 A 0
|
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1660 |
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1688 |
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1689 |
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1690 |
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1692 |
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1693 |
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1765 |
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1766 |
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1767 |
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1768 |
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1769 |
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1770 |
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1788 |
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1789 |
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1795 |
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1796 |
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1798 |
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1800 |
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1824 |
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1825 |
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1826 |
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1827 |
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1828 |
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1829 |
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1830 |
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1831 |
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1832 |
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1833 |
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1834 |
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1835 |
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1836 |
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1837 |
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1838 |
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1839 |
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1840 |
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1841 |
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1842 |
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1843 |
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1844 |
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1845 |
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1846 |
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1847 |
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1848 |
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1849 |
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1850 |
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1851 |
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1854 |
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1855 |
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1856 |
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1857 |
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1860 |
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1861 |
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1862 |
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1863 |
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1864 |
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1865 |
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1866 |
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1867 |
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1868 |
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1869 |
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1870 |
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1871 |
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1872 |
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1873 |
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1874 |
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1875 |
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1877 |
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1878 |
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1879 |
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1880 |
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1881 |
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1882 |
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1883 |
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1884 |
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1888 |
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1890 |
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1892 |
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1893 |
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1894 |
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1895 |
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1896 |
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1897 |
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1898 |
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1899 |
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1900 |
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1900 A 0
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1901 |
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1902 |
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1903 |
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1904 |
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1905 |
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1906 |
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1907 |
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1908 |
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1909 |
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1910 |
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1911 |
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1912 |
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1913 |
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1914 |
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1915 |
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1917 |
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1918 |
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1919 |
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1920 |
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1921 |
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1922 |
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1923 |
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1924 |
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1925 |
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1926 |
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1927 |
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1928 |
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1928 A 0
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1929 |
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1930 |
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1930 G 0
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1931 |
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1932 |
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1932 A 0
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1933 |
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1933 G 0
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1934 |
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1935 |
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1936 |
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1937 |
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1938 |
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1939 |
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1941 |
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1942 |
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1943 |
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1944 |
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1944 U 0
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1945 |
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1946 |
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1947 |
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1948 |
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1949 |
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1950 |
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1951 |
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1952 |
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1953 |
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1954 |
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1955 |
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1955 U 0
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1956 |
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1956 U 0
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1957 |
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1958 |
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1958 C 1948
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1959 |
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1960 |
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1961 |
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1962 |
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1963 |
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1964 |
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1965 |
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1966 |
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1967 |
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1968 |
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1969 |
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1970 |
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1971 |
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1972 |
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1973 |
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1974 |
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1975 |
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1975 G 1830
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1976 |
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1977 |
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1978 |
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1978 A 0
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1979 |
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1980 |
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1980 G 1771
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1981 |
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1982 |
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1983 |
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1984 |
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1985 |
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1986 |
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1987 |
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1987 A 1765
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1988 |
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1988 G 1764
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1989 |
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1990 |
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1991 |
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1991 U 1669
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1992 |
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1992 G 0
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1993 |
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1993 U 0
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1994 |
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1995 |
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1996 |
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1997 |
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1998 |
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1999 |
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1999 C 1661
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2000 |
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2000 C 1660
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2001 |
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2002 |
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2003 |
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2004 |
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2005 |
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2006 |
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2007 |
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2008 |
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2008 C 1649
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2009 |
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2009 A 1648
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2010 |
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2011 |
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2011 U 1269
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2012 |
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2012 G 0
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2013 |
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2013 A 0
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2014 |
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2014 A 0
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2015 |
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2015 A 0
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2016 |
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2016 U 0
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2017 |
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2018 |
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2018 G 0
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2019 |
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2019 A 0
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2020 |
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2020 A 0
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2021 |
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2022 |
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2023 |
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2024 |
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2025 |
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2026 |
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2027 |
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2028 |
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2029 |
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2030 |
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2033 |
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2040 |
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2044 |
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2045 |
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2046 |
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2047 |
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2048 |
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2049 |
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2050 |
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2051 |
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2052 |
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2054 |
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2055 |
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2056 |
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2060 |
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2062 |
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2063 |
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2064 |
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2064 C 2446
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2065 |
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2066 |
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2067 |
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2068 |
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2069 |
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2070 |
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2071 |
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2072 |
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2073 |
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2075 |
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2076 |
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2078 |
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2099 |
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2100 |
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2100 G 0
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2102 |
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2103 |
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2107 |
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2108 |
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2110 |
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2112 |
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2113 |
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2117 |
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2119 |
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2120 |
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2121 |
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2122 |
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2123 |
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2124 |
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2125 |
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2126 |
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2127 |
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2128 |
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2129 |
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2130 |
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2131 |
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2132 |
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2134 |
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2135 |
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2136 |
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2137 |
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2138 |
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2139 |
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2140 |
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2141 |
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2142 |
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2143 |
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2144 |
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2145 |
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2146 |
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2146 C 0
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2147 |
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2148 |
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2149 |
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2150 |
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2151 |
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2152 |
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2153 |
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2154 |
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2155 |
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2156 |
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2156 G 0
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2157 |
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2157 G 0
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2158 |
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2158 A 0
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2159 |
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2159 G 2129
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2160 |
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2161 |
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2161 C 2127
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2162 |
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2162 G 0
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2163 |
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2163 A 0
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2164 |
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2164 C 0
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2165 |
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2165 C 0
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2166 |
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2166 U 0
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2167 |
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2167 U 0
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2168 |
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2168 G 0
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2169 |
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2169 A 0
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2170 |
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2170 A 0
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2171 |
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2171 A 0
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2172 |
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2638 |
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2639 |
+
2639 A 0
|
2640 |
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2640 G 2774
|
2641 |
+
2641 G 2773
|
2642 |
+
2642 G 2772
|
2643 |
+
2643 G 2771
|
2644 |
+
2644 G 0
|
2645 |
+
2645 G 0
|
2646 |
+
2646 C 2674
|
2647 |
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2647 U 0
|
2648 |
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2648 G 0
|
2649 |
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2649 C 2671
|
2650 |
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2650 U 2670
|
2651 |
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2651 C 2669
|
2652 |
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2652 C 2668
|
2653 |
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2653 U 0
|
2654 |
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2654 A 0
|
2655 |
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2655 G 0
|
2656 |
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2656 U 0
|
2657 |
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2657 A 0
|
2658 |
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2658 C 2663
|
2659 |
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2659 G 0
|
2660 |
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2660 A 0
|
2661 |
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2661 G 0
|
2662 |
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2662 A 0
|
2663 |
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2663 G 2658
|
2664 |
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2664 G 0
|
2665 |
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2665 A 0
|
2666 |
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2666 C 0
|
2667 |
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2667 C 0
|
2668 |
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2668 G 2652
|
2669 |
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2669 G 2651
|
2670 |
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2670 A 2650
|
2671 |
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2671 G 2649
|
2672 |
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2672 U 0
|
2673 |
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2673 G 0
|
2674 |
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2674 G 2646
|
2675 |
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2675 A 0
|
2676 |
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2676 C 2731
|
2677 |
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2677 G 2730
|
2678 |
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2678 C 2729
|
2679 |
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2679 A 2728
|
2680 |
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2680 U 2727
|
2681 |
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2681 C 0
|
2682 |
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2682 A 0
|
2683 |
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2683 C 0
|
2684 |
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2684 U 0
|
2685 |
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2685 G 0
|
2686 |
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2686 G 0
|
2687 |
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|
2688 |
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2688 G 0
|
2689 |
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2689 U 0
|
2690 |
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2690 U 0
|
2691 |
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2691 C 2718
|
2692 |
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2692 G 2717
|
2693 |
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2693 G 2716
|
2694 |
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2694 G 2715
|
2695 |
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2695 U 0
|
2696 |
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2696 U 2711
|
2697 |
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2697 G 2710
|
2698 |
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2698 U 0
|
2699 |
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2699 C 2708
|
2700 |
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2700 A 2707
|
2701 |
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2701 U 2706
|
2702 |
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2702 G 0
|
2703 |
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2703 C 0
|
2704 |
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2704 C 0
|
2705 |
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2705 A 0
|
2706 |
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2706 A 2701
|
2707 |
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2707 U 2700
|
2708 |
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2708 G 2699
|
2709 |
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2709 G 0
|
2710 |
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2710 C 2697
|
2711 |
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2711 A 2696
|
2712 |
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2712 C 0
|
2713 |
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2713 U 0
|
2714 |
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2714 G 0
|
2715 |
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2715 C 2694
|
2716 |
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2716 C 2693
|
2717 |
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2717 C 2692
|
2718 |
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2718 G 2691
|
2719 |
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2719 G 0
|
2720 |
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2720 U 0
|
2721 |
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2721 A 0
|
2722 |
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2722 G 0
|
2723 |
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2723 C 0
|
2724 |
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2724 U 0
|
2725 |
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2725 A 0
|
2726 |
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2726 A 0
|
2727 |
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2727 A 2680
|
2728 |
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2728 U 2679
|
2729 |
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2729 G 2678
|
2730 |
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2730 C 2677
|
2731 |
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2731 G 2676
|
2732 |
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2732 G 0
|
2733 |
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2733 A 0
|
2734 |
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2734 A 0
|
2735 |
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2735 G 0
|
2736 |
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2736 A 2768
|
2737 |
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2737 G 2767
|
2738 |
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2738 A 0
|
2739 |
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2739 U 0
|
2740 |
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2740 A 0
|
2741 |
+
2741 A 0
|
2742 |
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2742 G 2762
|
2743 |
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2743 U 2761
|
2744 |
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2744 G 2760
|
2745 |
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2745 C 2759
|
2746 |
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2746 U 2758
|
2747 |
+
2747 G 0
|
2748 |
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2748 A 0
|
2749 |
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2749 A 0
|
2750 |
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2750 A 0
|
2751 |
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2751 G 0
|
2752 |
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2752 C 0
|
2753 |
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2753 A 0
|
2754 |
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2754 U 0
|
2755 |
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2755 C 0
|
2756 |
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2756 U 0
|
2757 |
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2757 A 0
|
2758 |
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2758 A 2746
|
2759 |
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2759 G 2745
|
2760 |
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2760 C 2744
|
2761 |
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2761 A 2743
|
2762 |
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2762 C 2742
|
2763 |
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2763 G 0
|
2764 |
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2764 A 0
|
2765 |
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2765 A 0
|
2766 |
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2766 A 0
|
2767 |
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2767 C 2737
|
2768 |
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2768 U 2736
|
2769 |
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2769 U 0
|
2770 |
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2770 G 0
|
2771 |
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2771 C 2643
|
2772 |
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2772 C 2642
|
2773 |
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2773 C 2641
|
2774 |
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2774 C 2640
|
2775 |
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2775 G 0
|
2776 |
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2776 A 0
|
2777 |
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2777 G 0
|
2778 |
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2778 A 0
|
2779 |
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2779 U 0
|
2780 |
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2780 G 0
|
2781 |
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2781 A 2637
|
2782 |
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2782 G 2636
|
2783 |
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2783 U 2635
|
2784 |
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2784 U 2634
|
2785 |
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2785 C 2633
|
2786 |
+
2786 U 2632
|
2787 |
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2787 C 2631
|
2788 |
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2788 C 2630
|
2789 |
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2789 C 0
|
2790 |
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2790 U 0
|
2791 |
+
2791 G 2805
|
2792 |
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2792 A 2804
|
2793 |
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2793 C 2803
|
2794 |
+
2794 C 2802
|
2795 |
+
2795 C 2801
|
2796 |
+
2796 U 2800
|
2797 |
+
2797 U 0
|
2798 |
+
2798 U 0
|
2799 |
+
2799 A 0
|
2800 |
+
2800 A 2796
|
2801 |
+
2801 G 2795
|
2802 |
+
2802 G 2794
|
2803 |
+
2803 G 2793
|
2804 |
+
2804 U 2792
|
2805 |
+
2805 C 2791
|
2806 |
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2806 C 0
|
2807 |
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2807 U 0
|
2808 |
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2808 G 0
|
2809 |
+
2809 A 0
|
2810 |
+
2810 A 0
|
2811 |
+
2811 G 2889
|
2812 |
+
2812 G 2888
|
2813 |
+
2813 A 2833
|
2814 |
+
2814 A 2832
|
2815 |
+
2815 C 2831
|
2816 |
+
2816 G 2830
|
2817 |
+
2817 U 2829
|
2818 |
+
2818 U 0
|
2819 |
+
2819 G 2827
|
2820 |
+
2820 A 0
|
2821 |
+
2821 A 0
|
2822 |
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2822 G 0
|
2823 |
+
2823 A 0
|
2824 |
+
2824 C 0
|
2825 |
+
2825 G 0
|
2826 |
+
2826 A 0
|
2827 |
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2827 C 2819
|
2828 |
+
2828 G 0
|
2829 |
+
2829 A 2817
|
2830 |
+
2830 C 2816
|
2831 |
+
2831 G 2815
|
2832 |
+
2832 U 2814
|
2833 |
+
2833 U 2813
|
2834 |
+
2834 G 0
|
2835 |
+
2835 A 0
|
2836 |
+
2836 U 2882
|
2837 |
+
2837 A 2881
|
2838 |
+
2838 G 2880
|
2839 |
+
2839 G 0
|
2840 |
+
2840 C 2877
|
2841 |
+
2841 C 2876
|
2842 |
+
2842 G 2875
|
2843 |
+
2843 G 2874
|
2844 |
+
2844 G 0
|
2845 |
+
2845 U 0
|
2846 |
+
2846 G 0
|
2847 |
+
2847 U 0
|
2848 |
+
2848 G 0
|
2849 |
+
2849 U 0
|
2850 |
+
2850 A 0
|
2851 |
+
2851 A 2866
|
2852 |
+
2852 G 0
|
2853 |
+
2853 C 2864
|
2854 |
+
2854 G 2863
|
2855 |
+
2855 C 2862
|
2856 |
+
2856 A 2861
|
2857 |
+
2857 G 0
|
2858 |
+
2858 C 0
|
2859 |
+
2859 G 0
|
2860 |
+
2860 A 0
|
2861 |
+
2861 U 2856
|
2862 |
+
2862 G 2855
|
2863 |
+
2863 C 2854
|
2864 |
+
2864 G 2853
|
2865 |
+
2865 U 0
|
2866 |
+
2866 U 2851
|
2867 |
+
2867 G 0
|
2868 |
+
2868 A 0
|
2869 |
+
2869 G 0
|
2870 |
+
2870 C 0
|
2871 |
+
2871 U 0
|
2872 |
+
2872 A 0
|
2873 |
+
2873 A 0
|
2874 |
+
2874 C 2843
|
2875 |
+
2875 C 2842
|
2876 |
+
2876 G 2841
|
2877 |
+
2877 G 2840
|
2878 |
+
2878 U 0
|
2879 |
+
2879 A 0
|
2880 |
+
2880 C 2838
|
2881 |
+
2881 U 2837
|
2882 |
+
2882 A 2836
|
2883 |
+
2883 A 0
|
2884 |
+
2884 U 0
|
2885 |
+
2885 G 0
|
2886 |
+
2886 A 0
|
2887 |
+
2887 A 0
|
2888 |
+
2888 C 2812
|
2889 |
+
2889 C 2811
|
2890 |
+
2890 G 0
|
2891 |
+
2891 U 0
|
2892 |
+
2892 G 0
|
2893 |
+
2893 A 0
|
2894 |
+
2894 G 0
|
2895 |
+
2895 G 8
|
2896 |
+
2896 C 7
|
2897 |
+
2897 U 6
|
2898 |
+
2898 U 5
|
2899 |
+
2899 A 4
|
2900 |
+
2900 A 3
|
2901 |
+
2901 C 2
|
2902 |
+
2902 C 1
|
2903 |
+
2903 U 0
|
2904 |
+
2904 U 0
|
source/bpSEQ_files_pdbee/1C2X-2D.bpseq
ADDED
@@ -0,0 +1,120 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 119
|
2 |
+
2 G 118
|
3 |
+
3 C 117
|
4 |
+
4 C 116
|
5 |
+
5 U 115
|
6 |
+
6 G 114
|
7 |
+
7 G 113
|
8 |
+
8 C 112
|
9 |
+
9 G 0
|
10 |
+
10 G 110
|
11 |
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11 C 0
|
12 |
+
12 C 0
|
13 |
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13 G 0
|
14 |
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14 U 0
|
15 |
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15 A 0
|
16 |
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16 G 68
|
17 |
+
17 C 67
|
18 |
+
18 G 0
|
19 |
+
19 C 64
|
20 |
+
20 G 63
|
21 |
+
21 G 62
|
22 |
+
22 U 0
|
23 |
+
23 G 60
|
24 |
+
24 G 0
|
25 |
+
25 U 0
|
26 |
+
26 C 0
|
27 |
+
27 C 0
|
28 |
+
28 C 0
|
29 |
+
29 A 0
|
30 |
+
30 C 0
|
31 |
+
31 C 51
|
32 |
+
32 U 50
|
33 |
+
33 G 49
|
34 |
+
34 A 48
|
35 |
+
35 C 0
|
36 |
+
36 C 0
|
37 |
+
37 C 0
|
38 |
+
38 C 0
|
39 |
+
39 A 0
|
40 |
+
40 U 0
|
41 |
+
41 G 0
|
42 |
+
42 C 0
|
43 |
+
43 C 0
|
44 |
+
44 G 0
|
45 |
+
45 A 0
|
46 |
+
46 A 0
|
47 |
+
47 C 0
|
48 |
+
48 U 34
|
49 |
+
49 C 33
|
50 |
+
50 A 32
|
51 |
+
51 G 31
|
52 |
+
52 A 0
|
53 |
+
53 A 0
|
54 |
+
54 G 0
|
55 |
+
55 U 0
|
56 |
+
56 G 0
|
57 |
+
57 A 0
|
58 |
+
58 A 0
|
59 |
+
59 A 0
|
60 |
+
60 C 23
|
61 |
+
61 G 0
|
62 |
+
62 C 21
|
63 |
+
63 C 20
|
64 |
+
64 G 19
|
65 |
+
65 U 0
|
66 |
+
66 A 0
|
67 |
+
67 G 17
|
68 |
+
68 C 16
|
69 |
+
69 G 0
|
70 |
+
70 C 106
|
71 |
+
71 C 105
|
72 |
+
72 G 0
|
73 |
+
73 A 0
|
74 |
+
74 U 0
|
75 |
+
75 G 0
|
76 |
+
76 G 0
|
77 |
+
77 U 0
|
78 |
+
78 A 0
|
79 |
+
79 G 97
|
80 |
+
80 U 96
|
81 |
+
81 G 95
|
82 |
+
82 U 94
|
83 |
+
83 G 93
|
84 |
+
84 G 92
|
85 |
+
85 G 91
|
86 |
+
86 G 90
|
87 |
+
87 U 0
|
88 |
+
88 C 0
|
89 |
+
89 U 0
|
90 |
+
90 C 86
|
91 |
+
91 C 85
|
92 |
+
92 C 84
|
93 |
+
93 C 83
|
94 |
+
94 A 82
|
95 |
+
95 U 81
|
96 |
+
96 G 80
|
97 |
+
97 C 79
|
98 |
+
98 G 0
|
99 |
+
99 A 0
|
100 |
+
100 G 0
|
101 |
+
101 A 0
|
102 |
+
102 G 0
|
103 |
+
103 U 0
|
104 |
+
104 A 0
|
105 |
+
105 G 71
|
106 |
+
106 G 70
|
107 |
+
107 G 0
|
108 |
+
108 A 0
|
109 |
+
109 A 0
|
110 |
+
110 C 10
|
111 |
+
111 U 0
|
112 |
+
112 G 8
|
113 |
+
113 C 7
|
114 |
+
114 C 6
|
115 |
+
115 A 5
|
116 |
+
116 G 4
|
117 |
+
117 G 3
|
118 |
+
118 C 2
|
119 |
+
119 A 1
|
120 |
+
120 U 0
|
source/bpSEQ_files_pdbee/1CQ5-2D.bpseq
ADDED
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 43
|
2 |
+
2 G 42
|
3 |
+
3 C 41
|
4 |
+
4 G 40
|
5 |
+
5 U 39
|
6 |
+
6 U 0
|
7 |
+
7 U 0
|
8 |
+
8 A 0
|
9 |
+
9 C 0
|
10 |
+
10 C 0
|
11 |
+
11 A 0
|
12 |
+
12 G 35
|
13 |
+
13 G 34
|
14 |
+
14 U 33
|
15 |
+
15 C 0
|
16 |
+
16 A 0
|
17 |
+
17 G 0
|
18 |
+
18 G 0
|
19 |
+
19 U 28
|
20 |
+
20 C 27
|
21 |
+
21 C 26
|
22 |
+
22 G 0
|
23 |
+
23 G 0
|
24 |
+
24 A 0
|
25 |
+
25 A 0
|
26 |
+
26 G 21
|
27 |
+
27 G 20
|
28 |
+
28 A 19
|
29 |
+
29 A 0
|
30 |
+
30 G 0
|
31 |
+
31 C 0
|
32 |
+
32 A 0
|
33 |
+
33 G 14
|
34 |
+
34 C 13
|
35 |
+
35 C 12
|
36 |
+
36 A 0
|
37 |
+
37 A 0
|
38 |
+
38 G 0
|
39 |
+
39 G 5
|
40 |
+
40 C 4
|
41 |
+
41 G 3
|
42 |
+
42 C 2
|
43 |
+
43 C 1
|
source/bpSEQ_files_pdbee/1CQL-2D.bpseq
ADDED
@@ -0,0 +1,43 @@
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1 |
+
1 g 43
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2 |
+
2 G 42
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3 |
+
3 C 41
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4 |
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4 G 40
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5 |
+
5 U 39
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6 |
+
6 U 38
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7 |
+
7 U 0
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8 |
+
8 A 0
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9 |
+
9 C 0
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10 |
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10 C 0
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11 |
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11 A 0
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12 |
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12 G 35
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13 |
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13 G 34
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14 |
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14 U 33
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15 |
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15 C 0
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16 |
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16 A 0
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17 |
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17 G 0
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18 |
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18 G 0
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19 |
+
19 U 28
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20 |
+
20 C 27
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21 |
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21 C 26
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22 |
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22 G 0
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23 |
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23 G 0
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24 |
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24 A 0
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25 |
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25 A 0
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26 |
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26 G 21
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27 |
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27 G 20
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28 |
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28 A 19
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29 |
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29 A 0
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30 |
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30 G 0
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31 |
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31 C 0
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32 |
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32 A 0
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33 |
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33 G 14
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34 |
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34 C 13
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35 |
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35 C 12
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36 |
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36 A 0
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37 |
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37 A 0
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38 |
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38 G 6
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39 |
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39 G 5
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40 |
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40 C 4
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41 |
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41 G 3
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42 |
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42 C 2
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43 |
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43 C 1
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source/bpSEQ_files_pdbee/1D0T-2D.bpseq
ADDED
@@ -0,0 +1,21 @@
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1 |
+
1 g 21
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2 |
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2 G 20
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3 |
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3 G 19
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4 |
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4 a 18
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5 |
+
5 U 17
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6 |
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6 C 16
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7 |
+
7 a 0
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8 |
+
8 C 15
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9 |
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9 C 14
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10 |
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10 a 0
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11 |
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11 U 0
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12 |
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12 U 0
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13 |
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13 a 0
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14 |
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14 G 9
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15 |
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15 G 8
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16 |
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16 G 6
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17 |
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17 a 5
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18 |
+
18 U 4
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19 |
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19 C 3
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20 |
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20 U 2
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21 |
+
21 C 1
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source/bpSEQ_files_pdbee/1D0U-2D.bpseq
ADDED
@@ -0,0 +1,21 @@
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1 |
+
1 g 21
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2 |
+
2 G 20
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3 |
+
3 G 19
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4 |
+
4 A 18
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5 |
+
5 U 17
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6 |
+
6 C 16
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7 |
+
7 A 0
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8 |
+
8 C 15
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9 |
+
9 C 14
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10 |
+
10 A 0
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11 |
+
11 U 0
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12 |
+
12 U 0
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13 |
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13 A 0
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14 |
+
14 G 9
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15 |
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15 G 8
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16 |
+
16 G 6
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17 |
+
17 A 5
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18 |
+
18 U 4
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19 |
+
19 C 3
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20 |
+
20 U 2
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21 |
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21 C 1
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source/bpSEQ_files_pdbee/1E4P-2D.bpseq
ADDED
@@ -0,0 +1,24 @@
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1 |
+
1 g 24
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2 |
+
2 U 23
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3 |
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3 G 22
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4 |
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4 C 21
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5 |
+
5 G 0
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6 |
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6 A 0
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7 |
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7 A 0
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8 |
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8 G 17
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9 |
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9 A 16
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10 |
+
10 C 15
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11 |
+
11 G 0
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12 |
+
12 A 0
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13 |
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13 A 0
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14 |
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14 A 0
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15 |
+
15 G 10
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16 |
+
16 U 9
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17 |
+
17 C 8
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18 |
+
18 C 0
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19 |
+
19 G 0
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20 |
+
20 A 0
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21 |
+
21 G 4
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22 |
+
22 C 3
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23 |
+
23 G 2
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24 |
+
24 C 1
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source/bpSEQ_files_pdbee/1E95-2D.bpseq
ADDED
@@ -0,0 +1,36 @@
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1 |
+
1 g 19
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2 |
+
2 C 18
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3 |
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3 G 17
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4 |
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4 G 16
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5 |
+
5 C 15
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6 |
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6 C 14
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7 |
+
7 A 0
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8 |
+
8 G 34
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9 |
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9 C 33
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10 |
+
10 U 32
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11 |
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11 C 31
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12 |
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12 C 30
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13 |
+
13 A 29
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14 |
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14 G 6
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15 |
+
15 G 5
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16 |
+
16 C 4
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17 |
+
17 C 3
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18 |
+
18 G 2
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19 |
+
19 C 1
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20 |
+
20 C 0
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21 |
+
21 A 0
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22 |
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22 A 0
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23 |
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23 A 0
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24 |
+
24 C 0
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25 |
+
25 A 0
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26 |
+
26 A 0
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27 |
+
27 U 0
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28 |
+
28 A 0
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29 |
+
29 U 13
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30 |
+
30 G 12
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31 |
+
31 G 11
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32 |
+
32 A 10
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33 |
+
33 G 9
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34 |
+
34 C 8
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35 |
+
35 A 0
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36 |
+
36 C 0
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source/bpSEQ_files_pdbee/1EBQ-2D.bpseq
ADDED
@@ -0,0 +1,29 @@
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1 |
+
1 g 29
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2 |
+
2 G 28
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3 |
+
3 U 27
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4 |
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4 G 26
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5 |
+
5 G 0
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6 |
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6 G 0
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7 |
+
7 C 22
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8 |
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8 G 21
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9 |
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9 C 20
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10 |
+
10 A 19
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11 |
+
11 G 18
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12 |
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12 C 17
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13 |
+
13 U 0
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14 |
+
14 U 0
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15 |
+
15 C 0
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16 |
+
16 G 0
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17 |
+
17 G 12
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18 |
+
18 C 11
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19 |
+
19 U 10
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20 |
+
20 G 9
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21 |
+
21 C 8
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22 |
+
22 G 7
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23 |
+
23 G 0
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24 |
+
24 U 0
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25 |
+
25 A 0
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26 |
+
26 C 4
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27 |
+
27 A 3
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28 |
+
28 C 2
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29 |
+
29 C 1
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source/bpSEQ_files_pdbee/1EBR-2D.bpseq
ADDED
@@ -0,0 +1,30 @@
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1 |
+
1 g 30
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2 |
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2 G 29
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3 |
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3 U 28
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4 |
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4 G 27
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5 |
+
5 G 0
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6 |
+
6 G 0
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7 |
+
7 C 23
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8 |
+
8 G 22
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9 |
+
9 C 20
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10 |
+
10 A 19
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11 |
+
11 G 18
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12 |
+
12 C 17
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13 |
+
13 U 0
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14 |
+
14 U 0
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15 |
+
15 C 0
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16 |
+
16 G 0
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17 |
+
17 G 12
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18 |
+
18 C 11
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19 |
+
19 U 10
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20 |
+
20 G 9
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21 |
+
21 A 0
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22 |
+
22 C 8
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23 |
+
23 G 7
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24 |
+
24 G 0
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25 |
+
25 U 0
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26 |
+
26 A 0
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27 |
+
27 C 4
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28 |
+
28 A 3
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29 |
+
29 C 2
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30 |
+
30 C 1
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source/bpSEQ_files_pdbee/1EBS-2D.bpseq
ADDED
@@ -0,0 +1,29 @@
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1 |
+
1 g 29
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2 |
+
2 G 28
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3 |
+
3 U 27
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4 |
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4 G 26
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5 |
+
5 G 0
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6 |
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6 G 0
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7 |
+
7 C 22
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8 |
+
8 G 21
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9 |
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9 C 20
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10 |
+
10 A 19
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11 |
+
11 G 18
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12 |
+
12 C 17
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13 |
+
13 U 0
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14 |
+
14 U 0
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15 |
+
15 C 0
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16 |
+
16 G 0
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17 |
+
17 G 12
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18 |
+
18 C 11
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19 |
+
19 U 10
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20 |
+
20 G 9
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21 |
+
21 C 8
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22 |
+
22 G 7
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23 |
+
23 G 0
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24 |
+
24 U 0
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25 |
+
25 A 0
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26 |
+
26 C 4
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27 |
+
27 A 3
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28 |
+
28 C 2
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29 |
+
29 C 1
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source/bpSEQ_files_pdbee/1ESH-2D.bpseq
ADDED
@@ -0,0 +1,13 @@
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1 |
+
1 g 13
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2 |
+
2 G 12
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3 |
+
3 U 11
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4 |
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4 G 10
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5 |
+
5 C 9
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6 |
+
6 A 0
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7 |
+
7 U 0
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8 |
+
8 A 0
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9 |
+
9 G 5
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10 |
+
10 C 4
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11 |
+
11 A 3
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12 |
+
12 C 2
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13 |
+
13 C 1
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source/bpSEQ_files_pdbee/1ESY-2D.bpseq
ADDED
@@ -0,0 +1,19 @@
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1 |
+
1 G 19
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2 |
+
2 G 18
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3 |
+
3 C 17
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4 |
+
4 G 16
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5 |
+
5 A 0
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6 |
+
6 C 13
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7 |
+
7 U 12
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8 |
+
8 G 0
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9 |
+
9 G 0
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10 |
+
10 U 0
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11 |
+
11 G 0
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12 |
+
12 A 7
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13 |
+
13 G 6
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14 |
+
14 U 0
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15 |
+
15 A 0
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16 |
+
16 C 4
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17 |
+
17 G 3
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18 |
+
18 C 2
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19 |
+
19 C 1
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source/bpSEQ_files_pdbee/1F6X-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
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1 |
+
1 g 27
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2 |
+
2 G 26
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3 |
+
3 A 25
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4 |
+
4 A 24
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5 |
+
5 G 23
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6 |
+
6 U 0
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7 |
+
7 C 22
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8 |
+
8 C 21
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9 |
+
9 G 20
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10 |
+
10 G 19
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11 |
+
11 U 18
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12 |
+
12 C 17
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13 |
+
13 U 0
|
14 |
+
14 U 0
|
15 |
+
15 C 0
|
16 |
+
16 G 0
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17 |
+
17 G 12
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18 |
+
18 A 11
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19 |
+
19 C 10
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20 |
+
20 C 9
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21 |
+
21 G 8
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22 |
+
22 G 7
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23 |
+
23 C 5
|
24 |
+
24 U 4
|
25 |
+
25 U 3
|
26 |
+
26 C 2
|
27 |
+
27 C 1
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source/bpSEQ_files_pdbee/1F6Z-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
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1 |
+
1 g 27
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2 |
+
2 G 26
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3 |
+
3 A 25
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4 |
+
4 A 24
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5 |
+
5 G 23
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6 |
+
6 U 22
|
7 |
+
7 U 0
|
8 |
+
8 C 21
|
9 |
+
9 G 20
|
10 |
+
10 G 19
|
11 |
+
11 U 18
|
12 |
+
12 C 17
|
13 |
+
13 U 0
|
14 |
+
14 U 0
|
15 |
+
15 C 0
|
16 |
+
16 G 0
|
17 |
+
17 G 12
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18 |
+
18 A 11
|
19 |
+
19 C 10
|
20 |
+
20 C 9
|
21 |
+
21 G 8
|
22 |
+
22 G 6
|
23 |
+
23 C 5
|
24 |
+
24 U 4
|
25 |
+
25 U 3
|
26 |
+
26 C 2
|
27 |
+
27 C 1
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source/bpSEQ_files_pdbee/1F7F-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
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1 |
+
1 g 27
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2 |
+
2 G 26
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3 |
+
3 A 25
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4 |
+
4 A 24
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5 |
+
5 G 23
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6 |
+
6 U 0
|
7 |
+
7 C 22
|
8 |
+
8 C 21
|
9 |
+
9 G 20
|
10 |
+
10 G 19
|
11 |
+
11 U 18
|
12 |
+
12 C 17
|
13 |
+
13 U 0
|
14 |
+
14 U 0
|
15 |
+
15 C 0
|
16 |
+
16 G 0
|
17 |
+
17 G 12
|
18 |
+
18 A 11
|
19 |
+
19 C 10
|
20 |
+
20 C 9
|
21 |
+
21 G 8
|
22 |
+
22 G 7
|
23 |
+
23 C 5
|
24 |
+
24 U 4
|
25 |
+
25 U 3
|
26 |
+
26 C 2
|
27 |
+
27 C 1
|
source/bpSEQ_files_pdbee/1F7G-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
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1 |
+
1 g 27
|
2 |
+
2 G 26
|
3 |
+
3 A 25
|
4 |
+
4 A 24
|
5 |
+
5 G 23
|
6 |
+
6 U 22
|
7 |
+
7 U 0
|
8 |
+
8 C 21
|
9 |
+
9 G 20
|
10 |
+
10 G 19
|
11 |
+
11 U 18
|
12 |
+
12 C 17
|
13 |
+
13 U 0
|
14 |
+
14 U 0
|
15 |
+
15 C 0
|
16 |
+
16 G 0
|
17 |
+
17 G 12
|
18 |
+
18 A 11
|
19 |
+
19 C 10
|
20 |
+
20 C 9
|
21 |
+
21 G 8
|
22 |
+
22 G 6
|
23 |
+
23 C 5
|
24 |
+
24 U 4
|
25 |
+
25 U 3
|
26 |
+
26 C 2
|
27 |
+
27 C 1
|
source/bpSEQ_files_pdbee/1F84-2D.bpseq
ADDED
@@ -0,0 +1,29 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 0
|
2 |
+
2 G 28
|
3 |
+
3 C 27
|
4 |
+
4 C 26
|
5 |
+
5 G 0
|
6 |
+
6 A 0
|
7 |
+
7 G 0
|
8 |
+
8 U 0
|
9 |
+
9 A 0
|
10 |
+
10 G 21
|
11 |
+
11 U 20
|
12 |
+
12 G 19
|
13 |
+
13 U 0
|
14 |
+
14 U 0
|
15 |
+
15 G 0
|
16 |
+
16 G 0
|
17 |
+
17 G 0
|
18 |
+
18 U 0
|
19 |
+
19 C 12
|
20 |
+
20 G 11
|
21 |
+
21 C 10
|
22 |
+
22 G 0
|
23 |
+
23 A 0
|
24 |
+
24 A 0
|
25 |
+
25 A 0
|
26 |
+
26 G 4
|
27 |
+
27 G 3
|
28 |
+
28 C 2
|
29 |
+
29 C 0
|
source/bpSEQ_files_pdbee/1F85-2D.bpseq
ADDED
@@ -0,0 +1,14 @@
|
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|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
1 |
+
1 g 14
|
2 |
+
2 G 13
|
3 |
+
3 C 12
|
4 |
+
4 C 11
|
5 |
+
5 U 10
|
6 |
+
6 G 0
|
7 |
+
7 A 0
|
8 |
+
8 U 0
|
9 |
+
9 A 0
|
10 |
+
10 G 5
|
11 |
+
11 G 4
|
12 |
+
12 G 3
|
13 |
+
13 U 2
|
14 |
+
14 C 1
|
source/bpSEQ_files_pdbee/1F9L-2D.bpseq
ADDED
@@ -0,0 +1,22 @@
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 22
|
2 |
+
2 G 21
|
3 |
+
3 C 20
|
4 |
+
4 G 19
|
5 |
+
5 A 0
|
6 |
+
6 A 0
|
7 |
+
7 G 16
|
8 |
+
8 U 15
|
9 |
+
9 C 14
|
10 |
+
10 G 0
|
11 |
+
11 A 0
|
12 |
+
12 A 0
|
13 |
+
13 A 0
|
14 |
+
14 G 9
|
15 |
+
15 A 8
|
16 |
+
16 U 7
|
17 |
+
17 G 0
|
18 |
+
18 G 0
|
19 |
+
19 C 4
|
20 |
+
20 G 3
|
21 |
+
21 C 2
|
22 |
+
22 C 1
|
source/bpSEQ_files_pdbee/1FEQ-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
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|
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|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 13
|
6 |
+
6 C 0
|
7 |
+
7 U 0
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 a 0
|
12 |
+
12 A 0
|
13 |
+
13 U 5
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 C 1
|
source/bpSEQ_files_pdbee/1FHK-2D.bpseq
ADDED
@@ -0,0 +1,14 @@
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 14
|
2 |
+
2 G 13
|
3 |
+
3 C 12
|
4 |
+
4 G 0
|
5 |
+
5 G 0
|
6 |
+
6 U 0
|
7 |
+
7 G 0
|
8 |
+
8 A 0
|
9 |
+
9 A 0
|
10 |
+
10 A 0
|
11 |
+
11 U 0
|
12 |
+
12 G 3
|
13 |
+
13 C 2
|
14 |
+
14 C 1
|
source/bpSEQ_files_pdbee/1FL8-2D.bpseq
ADDED
@@ -0,0 +1,17 @@
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|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 u 17
|
2 |
+
2 C 16
|
3 |
+
3 A 15
|
4 |
+
4 G 14
|
5 |
+
5 A 0
|
6 |
+
6 C 0
|
7 |
+
7 U 0
|
8 |
+
8 u 0
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 a 0
|
12 |
+
12 A 0
|
13 |
+
13 u 0
|
14 |
+
14 C 4
|
15 |
+
15 U 3
|
16 |
+
16 G 2
|
17 |
+
17 A 1
|
source/bpSEQ_files_pdbee/1FQZ-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 27
|
2 |
+
2 C 26
|
3 |
+
3 C 25
|
4 |
+
4 G 0
|
5 |
+
5 A 0
|
6 |
+
6 G 0
|
7 |
+
7 U 0
|
8 |
+
8 A 0
|
9 |
+
9 G 20
|
10 |
+
10 U 19
|
11 |
+
11 G 18
|
12 |
+
12 U 0
|
13 |
+
13 U 0
|
14 |
+
14 G 0
|
15 |
+
15 G 0
|
16 |
+
16 G 0
|
17 |
+
17 U 0
|
18 |
+
18 C 11
|
19 |
+
19 G 10
|
20 |
+
20 C 9
|
21 |
+
21 G 0
|
22 |
+
22 A 0
|
23 |
+
23 A 0
|
24 |
+
24 A 0
|
25 |
+
25 G 3
|
26 |
+
26 G 2
|
27 |
+
27 C 1
|
source/bpSEQ_files_pdbee/1FYO-2D.bpseq
ADDED
@@ -0,0 +1,27 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 27
|
2 |
+
2 G 26
|
3 |
+
3 C 25
|
4 |
+
4 G 24
|
5 |
+
5 U 0
|
6 |
+
6 C 22
|
7 |
+
7 G 0
|
8 |
+
8 C 19
|
9 |
+
9 A 18
|
10 |
+
10 C 17
|
11 |
+
11 C 16
|
12 |
+
12 U 0
|
13 |
+
13 U 0
|
14 |
+
14 C 0
|
15 |
+
15 G 0
|
16 |
+
16 G 11
|
17 |
+
17 G 10
|
18 |
+
18 U 9
|
19 |
+
19 G 8
|
20 |
+
20 A 0
|
21 |
+
21 A 0
|
22 |
+
22 G 6
|
23 |
+
23 U 0
|
24 |
+
24 C 4
|
25 |
+
25 G 3
|
26 |
+
26 C 2
|
27 |
+
27 C 1
|
source/bpSEQ_files_pdbee/1HLX-2D.bpseq
ADDED
@@ -0,0 +1,20 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 20
|
2 |
+
2 G 19
|
3 |
+
3 G 18
|
4 |
+
4 A 17
|
5 |
+
5 U 16
|
6 |
+
6 A 15
|
7 |
+
7 A 14
|
8 |
+
8 C 13
|
9 |
+
9 U 0
|
10 |
+
10 U 0
|
11 |
+
11 C 0
|
12 |
+
12 G 0
|
13 |
+
13 G 8
|
14 |
+
14 U 7
|
15 |
+
15 U 6
|
16 |
+
16 G 5
|
17 |
+
17 U 4
|
18 |
+
18 C 3
|
19 |
+
19 C 2
|
20 |
+
20 C 1
|
source/bpSEQ_files_pdbee/1HS1-2D.bpseq
ADDED
@@ -0,0 +1,13 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 12
|
2 |
+
2 C 11
|
3 |
+
3 G 10
|
4 |
+
4 U 0
|
5 |
+
5 U 0
|
6 |
+
6 A 0
|
7 |
+
7 A 0
|
8 |
+
8 C 0
|
9 |
+
9 U 0
|
10 |
+
10 C 3
|
11 |
+
11 G 2
|
12 |
+
12 C 1
|
13 |
+
13 A 0
|
source/bpSEQ_files_pdbee/1HS2-2D.bpseq
ADDED
@@ -0,0 +1,13 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 12
|
2 |
+
2 C 11
|
3 |
+
3 G 10
|
4 |
+
4 U 0
|
5 |
+
5 U 0
|
6 |
+
6 A 0
|
7 |
+
7 A 0
|
8 |
+
8 G 0
|
9 |
+
9 U 0
|
10 |
+
10 C 3
|
11 |
+
11 G 2
|
12 |
+
12 C 1
|
13 |
+
13 A 0
|
source/bpSEQ_files_pdbee/1HS3-2D.bpseq
ADDED
@@ -0,0 +1,13 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
1 g 12
|
2 |
+
2 C 11
|
3 |
+
3 G 10
|
4 |
+
4 U 0
|
5 |
+
5 U 0
|
6 |
+
6 A 0
|
7 |
+
7 A 0
|
8 |
+
8 U 0
|
9 |
+
9 U 0
|
10 |
+
10 C 3
|
11 |
+
11 G 2
|
12 |
+
12 C 1
|
13 |
+
13 A 0
|