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README.md

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+---
+language: rna
+tags:
+  - Biology
+  - RNA
+license:
+  - agpl-3.0
+size_categories:
+  - 1K<n<10K
+task_categories:
+  - text-generation
+  - fill-mask
+task_ids:
+  - language-modeling
+  - masked-language-modeling
+pretty_name: EternaBench-Switch
+library_name: multimolecule
+---
+
+# EternaBench-Switch
+
+![EternaBench-Switch](https://eternagame.org/sites/default/files/thumb_eternabench_paper.png)
+
+EternaBench is a database comprising the diverse high-throughput structural data gathered through the crowdsourced RNA design project Eterna, to evaluate the performance of a wide set of structure algorithms.
+
+## Disclaimer
+
+This is an UNOFFICIAL release of the [EternaBench-Switch](https://github.com/eternagame/EternaBench) by Hannah K. Wayment-Steele, et al.
+
+**The team releasing EternaBench-Switch did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.**
+
+## Dataset Description
+
+- **Homepage**: https://multimolecule.danling.org/datasets/eternabench_switch
+- **datasets**: https://huggingface.co/datasets/multimolecule/eternabench-switch
+- **Point of Contact**: [Rhiju Das](https://biochemistry.stanford.edu/people/rhiju-das/)
+
+## Example Entry
+
+| ID       | design_name            | sequence         | structure        | reactivity                 | errors                      | signal_to_noise |
+| -------- | ---------------------- | ---------------- | ---------------- | -------------------------- | --------------------------- | --------------- |
+| 769337-1 | d+m plots weaker again | GGAAAAAAAAAAA... | ................ | [0.642,1.4853,0.1629, ...] | [0.3181,0.4221,0.1823, ...] | 3.227           |
+
+## Column Description
+
+The EternaBench-Switch dataset consists of the following columns, providing crucial insights for understanding RNA stability for vaccine design:
+
+- **ID**:
+  A unique identifier for each RNA sequence entry.
+
+- **design_name**:
+  The name given to each RNA design by contributors, used for easy reference.
+
+- **sequence**:
+  The nucleotide sequence of the RNA, using standard bases.
+
+- **structure**:
+  The predicted secondary structure of the RNA, represented using dot-bracket notation.
+  The structure helps determine the likely secondary interactions within each RNA molecule.
+
+- **reactivity**:
+  A list of floating-point values that provide an estimate of the likelihood of the RNA backbone being cut at each nucleotide position.
+  These values help determine the stability of the RNA structure under various experimental conditions.
+
+- **errors**:
+  Arrays of floating-point numbers indicating the experimental errors corresponding to the measurements in the **reactivity**.
+  These values help quantify the uncertainty in the degradation rates and reactivity measurements.
+
+## Related Datasets
+
+- [EternaBench-CM](https://huggingface.co/datasets/multimolecule/eternabench-cm)
+- [EternaBench-Switch](https://huggingface.co/datasets/multimolecule/eternabench-switch)
+
+## License
+
+This dataset is licensed under the [AGPL-3.0 License](https://www.gnu.org/licenses/agpl-3.0.html).
+
+```spdx
+SPDX-License-Identifier: AGPL-3.0-or-later
+```
+
+## Citation
+
+```bibtex
+@article{waymentsteele2022rna,
+  author    = {Wayment-Steele, Hannah K and Kladwang, Wipapat and Strom, Alexandra I and Lee, Jeehyung and Treuille, Adrien and Becka, Alex and {Eterna Participants} and Das, Rhiju},
+  journal   = {Nature Methods},
+  month     = oct,
+  number    = 10,
+  pages     = {1234--1242},
+  publisher = {Springer Science and Business Media LLC},
+  title     = {{RNA} secondary structure packages evaluated and improved by high-throughput experiments},
+  volume    = 19,
+  year      = 2022
+}
+```

test.parquet

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train.parquet

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