Upload config.json with huggingface_hub
Browse files- config.json +122 -0
config.json
ADDED
|
@@ -0,0 +1,122 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"description": "Viral Genome Dataset with standardized metadata",
|
| 3 |
+
"citation": "",
|
| 4 |
+
"homepage": "https://huggingface.co/datasets/hiyata/Virus-Host-Genomes",
|
| 5 |
+
"license": "apache-2.0",
|
| 6 |
+
"features": {
|
| 7 |
+
"sequence": {
|
| 8 |
+
"dtype": "string",
|
| 9 |
+
"_type": "Value",
|
| 10 |
+
"description": "The complete viral genome sequence"
|
| 11 |
+
},
|
| 12 |
+
"accession": {
|
| 13 |
+
"dtype": "string",
|
| 14 |
+
"_type": "Value",
|
| 15 |
+
"description": "Unique identifier for the viral sequence"
|
| 16 |
+
},
|
| 17 |
+
"host": {
|
| 18 |
+
"dtype": "string",
|
| 19 |
+
"_type": "Value",
|
| 20 |
+
"description": "Isolation from human or non-human host"
|
| 21 |
+
},
|
| 22 |
+
"genus": {
|
| 23 |
+
"dtype": "string",
|
| 24 |
+
"_type": "Value",
|
| 25 |
+
"description": "Taxonomic genus of the virus"
|
| 26 |
+
},
|
| 27 |
+
"isolation_date": {
|
| 28 |
+
"dtype": "string",
|
| 29 |
+
"_type": "Value",
|
| 30 |
+
"description": "Date when the virus was isolated"
|
| 31 |
+
},
|
| 32 |
+
"strain_name": {
|
| 33 |
+
"dtype": "string",
|
| 34 |
+
"_type": "Value",
|
| 35 |
+
"description": "Name of the viral strain"
|
| 36 |
+
},
|
| 37 |
+
"location": {
|
| 38 |
+
"dtype": "string",
|
| 39 |
+
"_type": "Value",
|
| 40 |
+
"description": "Original location where the virus was collected"
|
| 41 |
+
},
|
| 42 |
+
"virus_name": {
|
| 43 |
+
"dtype": "string",
|
| 44 |
+
"_type": "Value",
|
| 45 |
+
"description": "Name of the virus"
|
| 46 |
+
},
|
| 47 |
+
"isolation_source": {
|
| 48 |
+
"dtype": "string",
|
| 49 |
+
"_type": "Value",
|
| 50 |
+
"description": "Source from which the virus was isolated"
|
| 51 |
+
},
|
| 52 |
+
"lab_culture": {
|
| 53 |
+
"dtype": "string",
|
| 54 |
+
"_type": "Value",
|
| 55 |
+
"description": "Whether the virus was cultured in a laboratory"
|
| 56 |
+
},
|
| 57 |
+
"wastewater_sewage": {
|
| 58 |
+
"dtype": "string",
|
| 59 |
+
"_type": "Value",
|
| 60 |
+
"description": "Whether the virus was isolated from wastewater/sewage"
|
| 61 |
+
},
|
| 62 |
+
"standardized_host": {
|
| 63 |
+
"dtype": "string",
|
| 64 |
+
"_type": "Value",
|
| 65 |
+
"description": "Standardized name of the host organism"
|
| 66 |
+
},
|
| 67 |
+
"host_category": {
|
| 68 |
+
"dtype": "string",
|
| 69 |
+
"_type": "Value",
|
| 70 |
+
"description": "Category of the host organism"
|
| 71 |
+
},
|
| 72 |
+
"standardized_location": {
|
| 73 |
+
"dtype": "string",
|
| 74 |
+
"_type": "Value",
|
| 75 |
+
"description": "Standardized location name"
|
| 76 |
+
},
|
| 77 |
+
"zoonotic": {
|
| 78 |
+
"dtype": "string",
|
| 79 |
+
"_type": "Value",
|
| 80 |
+
"description": "Whether the virus is zoonotic"
|
| 81 |
+
},
|
| 82 |
+
"processing_method": {
|
| 83 |
+
"dtype": "string",
|
| 84 |
+
"_type": "Value",
|
| 85 |
+
"description": "Method used to process the sample"
|
| 86 |
+
},
|
| 87 |
+
"gemini_annotated": {
|
| 88 |
+
"dtype": "string",
|
| 89 |
+
"_type": "Value",
|
| 90 |
+
"description": "Whether the sequence was annotated by GEMINI"
|
| 91 |
+
},
|
| 92 |
+
"is_segmented": {
|
| 93 |
+
"dtype": "string",
|
| 94 |
+
"_type": "Value",
|
| 95 |
+
"description": "Whether the virus has a segmented genome"
|
| 96 |
+
},
|
| 97 |
+
"segment_label": {
|
| 98 |
+
"dtype": "string",
|
| 99 |
+
"_type": "Value",
|
| 100 |
+
"description": "Label for genome segment if applicable"
|
| 101 |
+
},
|
| 102 |
+
"family": {
|
| 103 |
+
"dtype": "string",
|
| 104 |
+
"_type": "Value",
|
| 105 |
+
"description": "Viral family name extracted from the FASTA filename"
|
| 106 |
+
}
|
| 107 |
+
},
|
| 108 |
+
"splits": {
|
| 109 |
+
"train": {
|
| 110 |
+
"name": "train",
|
| 111 |
+
"num_bytes": null,
|
| 112 |
+
"num_examples": 51935,
|
| 113 |
+
"dataset_name": "viral_genomes"
|
| 114 |
+
},
|
| 115 |
+
"test": {
|
| 116 |
+
"name": "test",
|
| 117 |
+
"num_bytes": null,
|
| 118 |
+
"num_examples": 6111,
|
| 119 |
+
"dataset_name": "viral_genomes"
|
| 120 |
+
}
|
| 121 |
+
}
|
| 122 |
+
}
|