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Delete durhamtrees.py

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- # -*- coding: utf-8 -*-
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- """DurhamTrees
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-
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- Automatically generated by Colaboratory.
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-
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- Original file is located at
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- https://colab.research.google.com/drive/1C4L9gZ_hkydWda4rUgNuU-GNJa9fBV-b
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- """
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-
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- # -*- coding: utf-8 -*-
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- """DurhamTrees
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-
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- Automatically generated by Colaboratory.
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-
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- Original file is located at
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- https://colab.research.google.com/drive/1czig7JIbqTKp9wNUIRcdMEDF3pFgtxKv
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- """
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-
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- import pandas as pd
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- import geopandas as gpd
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- from datasets import (
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- GeneratorBasedBuilder, Version, DownloadManager, SplitGenerator, Split,
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- Features, Value, BuilderConfig, DatasetInfo
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- )
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- import matplotlib.pyplot as plt
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- import seaborn as sns
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- import csv
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- import json
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- from shapely.geometry import Point
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-
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- # URL definitions
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- _URLS = {
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- "first_domain1": {
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- "csv_file": "https://drive.google.com/uc?export=download&id=1P61XDtW9fkRYKj6ULhxJyOHG7PqFhZ3s",
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- "geojson_file": "https://drive.google.com/uc?export=download&id=1St986GN9m8r1_xwyWWTJBmZG7iadYHgW",
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- },
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- "first_domain2": {
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- "csv_file2": "https://drive.google.com/uc?export=download&id=1QyTJZltvqxiZBDm1V6XcSeykBreY43tj",
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- },
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- }
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-
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- class DurhamTrees(GeneratorBasedBuilder):
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- VERSION = Version("1.0.0")
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-
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- class MyConfig(BuilderConfig):
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- def __init__(self, **kwargs):
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- super().__init__(**kwargs)
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-
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- BUILDER_CONFIGS = [
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- MyConfig(name="class1_domain1", description="this is combined of csv and geojson"),
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- MyConfig(name="class2_domain1", description="this is csv file"),
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- ]
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-
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- def _info(self):
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- return DatasetInfo(
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- description="This dataset combines information from both classes, with additional processing for csv_file2.",
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- features=Features({
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- "feature1_from_class1": Value("string"),
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- "geometry":Value("string"),
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- "OBJECTID": Value("int64"),
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- "X": Value("float64"),
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- "Y": Value("float64"),
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- "feature1_from_class2": Value("string"),
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- "streetaddress": Value("string"),
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- "city": Value("string"),
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- "facilityid": Value("int64"),
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- "present": Value("string"),
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- "genus": Value("string"),
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- "species": Value("string"),
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- "commonname": Value("string"),
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- "diameterin": Value("float64"),
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- "condition": Value("string"),
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- "neighborhood": Value("string"),
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- "program": Value("string"),
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- "plantingw": Value("string"),
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- "plantingcond": Value("string"),
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- "underpwerlins": Value("string"),
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- "GlobalID": Value("string"),
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- "created_user": Value("string"),
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- "last_edited_user": Value("string"),
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- "isoprene": Value("float64"),
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- "monoterpene": Value("float64"),
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- "monoterpene_class2": Value("float64"),
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- "vocs": Value("float64"),
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- "coremoved_ozperyr": Value("float64"),
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- "coremoved_dolperyr": Value("float64"),
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- "o3removed_ozperyr": Value("float64"),
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- "o3removed_dolperyr": Value("float64"),
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- "no2removed_ozperyr": Value("float64"),
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- "no2removed_dolperyr": Value("float64"),
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- "so2removed_ozperyr": Value("float64"),
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- "so2removed_dolperyr": Value("float64"),
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- "pm10removed_ozperyr": Value("float64"),
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- "pm10removed_dolperyr": Value("float64"),
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- "pm25removed_ozperyr": Value("float64"),
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- "o2production_lbperyr": Value("float64"),
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- "replacevalue_dol": Value("float64"),
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- "carbonstorage_lb": Value("float64"),
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- "carbonstorage_dol": Value("float64"),
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- "grosscarseq_lbperyr": Value("float64"),
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- "grosscarseq_dolperyr": Value("float64"),
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- "avoidrunoff_ft2peryr": Value("float64"),
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- "avoidrunoff_dol2peryr": Value("float64"),
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- "polremoved_ozperyr": Value("float64"),
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- "polremoved_dolperyr": Value("float64"),
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- "totannbenefits_dolperyr": Value("float64"),
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- "leafarea_sqft": Value("float64"),
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- "potevapotran_cuftperyr": Value("float64"),
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- "evaporation_cuftperyr": Value("float64"),
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- "transpiration_cuftperyr": Value("float64"),
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- "h2ointercept_cuftperyr": Value("float64"),
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- "carbonavoid_lbperyr": Value("float64"),
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- "carbonavoid_dolperyr": Value("float64"),
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- "heating_mbtuperyr": Value("float64"),
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- "heating_dolperyrmbtu": Value("float64"),
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- "heating_kwhperyr": Value("float64"),
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- "heating_dolperyrmwh": Value("float64"),
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- "cooling_kwhperyr": Value("float64"),
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- "cooling_dolperyr": Value("float64"),
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- "totalenerg_dolperyr": Value("float64"),
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- }),
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- supervised_keys=None,
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- homepage="https://github.com/AuraMa111?tab=repositories",
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- citation="Citation for the combined dataset",
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- )
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-
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-
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- def _split_generators(self, dl_manager):
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- downloaded_files = dl_manager.download_and_extract(_URLS)
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-
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- return [
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- SplitGenerator(
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- name=Split.TRAIN,
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- gen_kwargs={
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- "class1_data_file": downloaded_files["first_domain1"]["csv_file"],
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- "class1_geojson_file": downloaded_files["first_domain1"]["geojson_file"],
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- "class2_data_file": downloaded_files["first_domain2"]["csv_file2"],
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- "split": Split.TRAIN,
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- },
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- ),
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- SplitGenerator(
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- name=Split.VALIDATION,
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- gen_kwargs={
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- "class1_data_file": downloaded_files["first_domain1"]["csv_file"],
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- "class1_geojson_file": downloaded_files["first_domain1"]["geojson_file"],
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- "class2_data_file": downloaded_files["first_domain2"]["csv_file2"],
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- "split": Split.VALIDATION,
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- },
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- ),
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- SplitGenerator(
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- name=Split.TEST,
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- gen_kwargs={
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- "class1_data_file": downloaded_files["first_domain1"]["csv_file"],
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- "class1_geojson_file": downloaded_files["first_domain1"]["geojson_file"],
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- "class2_data_file": downloaded_files["first_domain2"]["csv_file2"],
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- "split": Split.TEST,
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- },
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- ),
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- ]
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-
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- def _generate_examples(self, class1_data_file, class1_geojson_file, class2_data_file, split):
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- if split == Split.TRAIN:
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- class1_examples = list(self._generate_examples_from_class1(class1_data_file, class1_geojson_file))
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- class2_examples = list(self._generate_examples_from_class2(class2_data_file))
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- examples = class1_examples + class2_examples
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- elif split == Split.VALIDATION:
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- # Adjust this logic based on your validation data requirements
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- examples = []
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- elif split == Split.TEST:
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- # Adjust this logic based on your test data requirements
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- examples = []
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-
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- df = pd.DataFrame(examples)
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-
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- for id_, example in enumerate(examples):
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- if not isinstance(example, dict):
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- example = {"example": example}
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- yield id_, example
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-
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- def _generate_examples_from_class1(self, csv_filepath, geojson_filepath):
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- columns_to_extract = ["OBJECTID", "X", "Y"] # Remove "geometry" from columns_to_extract
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- csv_data = pd.read_csv(csv_filepath)
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-
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- with open(geojson_filepath, 'r') as file:
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- geojson_dict = json.load(file)
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- gdf = gpd.GeoDataFrame.from_features(geojson_dict['features'], crs="EPSG:4326") # Specify the CRS if known
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- merged_data = gdf.merge(csv_data, on='OBJECTID')
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- final_data = merged_data[columns_to_extract + ['geometry']] # Include 'geometry' in the final_data
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- for id_, row in final_data.iterrows():
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- example = row.to_dict()
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- yield id_, example
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-
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- def _generate_examples_from_class2(self, csv_filepath2):
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- csv_data2 = pd.read_csv(csv_filepath2)
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-
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- columns_to_extract = [
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- "streetaddress", "city", "facilityid", "present", "genus", "species",
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- "commonname", "diameterin", "condition", "neighborhood", "program", "plantingw",
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- "plantingcond", "underpwerlins", "GlobalID", "created_user", "last_edited_user", "isoprene", "monoterpene",
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- "monoterpene", "vocs", "coremoved_ozperyr", "coremoved_dolperyr",
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- "o3removed_ozperyr", "o3removed_dolperyr", "no2removed_ozperyr", "no2removed_dolperyr",
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- "so2removed_ozperyr", "so2removed_dolperyr", "pm10removed_ozperyr", "pm10removed_dolperyr",
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- "pm25removed_ozperyr", "o2production_lbperyr", "replacevalue_dol", "carbonstorage_lb",
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- "carbonstorage_dol", "grosscarseq_lbperyr", "grosscarseq_dolperyr", "polremoved_ozperyr", "polremoved_dolperyr",
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- "totannbenefits_dolperyr", "leafarea_sqft", "potevapotran_cuftperyr", "evaporation_cuftperyr",
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- "transpiration_cuftperyr", "h2ointercept_cuftperyr",
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- "carbonavoid_lbperyr", "carbonavoid_dolperyr", "heating_mbtuperyr",
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- "heating_dolperyrmbtu", "heating_kwhperyr", "heating_dolperyrmwh", "cooling_kwhperyr",
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- "cooling_dolperyr", "totalenerg_dolperyr",
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- ]
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-
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- final_data = csv_data2[columns_to_extract]
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- for id_, row in final_data.iterrows():
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- example = row.to_dict()
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- non_empty_example = {key: value for key, value in example.items() if pd.notna(value)}
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- yield id_, non_empty_example
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-
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- def _correlation_analysis(self, df):
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- correlation_matrix = df.corr()
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- sns.heatmap(correlation_matrix, annot=True, cmap='coolwarm', linewidths=.5)
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- plt.title("Correlation Analysis")
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- plt.show()
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-
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- # Create an instance of the DurhamTrees class for training
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- durham_trees_dataset_train = DurhamTrees(name='class1_domain1', split=Split.TRAIN)
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-
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- # Build the training dataset
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- durham_trees_dataset_train.download_and_prepare()
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- dataset_train = durham_trees_dataset_train.as_dataset()
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-
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- # Create an instance of the DurhamTrees class for validation
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- durham_trees_dataset_val = DurhamTrees(name='class1_domain1', split=Split.VALIDATION)
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-
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- # Build the validation dataset
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- durham_trees_dataset_val.download_and_prepare()
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- dataset_val = durham_trees_dataset_val.as_dataset()
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-
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- # Create an instance of the DurhamTrees class for testing
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- durham_trees_dataset_test = DurhamTrees(name='class1_domain1', split=Split.TEST)
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-
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- # Build the test dataset
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- durham_trees_dataset_test.download_and_prepare()
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- dataset_test = durham_trees_dataset_test.as_dataset()