TypeError in ./examples/cell_classification.ipynb
#62
by
Jiahaoszu
- opened
Dear authors,
It seems that there is an error in the code ./examples/cell_classification.ipynb in
' trainer = Trainer(
model=model,
args=training_args_init,
data_collator=DataCollatorForCellClassification(), <------
train_dataset=organ_trainset,
eval_dataset=organ_evalset,
compute_metrics=compute_metrics
)
'
TypeError: DataCollatorForTokenClassification.init() missing 1 required positional argument: 'tokenizer'
Thank you for your interest in Geneformer. This seems similar to closed issue #31. Could you please try pulling the current version?
Thank you very much.
Your work geneformer is wonderful!
Jiahaoszu
changed discussion status to
closed