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README.md
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---
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tags:
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- generated_from_trainer
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model-index:
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- name: protBERTbfd_AAV2_regressor
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# protBERTbfd_AAV2_regressor
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This model is a fine-tuned version of [Rostlab/prot_bert_bfd](https://huggingface.co/Rostlab/prot_bert_bfd) on an unknown dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.0327
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- Mse: 0.0327
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- Rmse: 0.1808
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- Mae: 0.0618
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- R2: 0.8691
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- Smape: 101.2324
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 5e-05
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- train_batch_size: 64
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- eval_batch_size: 64
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- seed: 42
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- gradient_accumulation_steps: 64
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- total_train_batch_size: 4096
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- lr_scheduler_warmup_steps: 200
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- num_epochs: 6
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Mse | Rmse | Mae | R2 | Smape |
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|:-------------:|:-----:|:----:|:---------------:|:------:|:------:|:------:|:------:|:--------:|
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| No log | 1.0 | 58 | 0.0985 | 0.0985 | 0.3138 | 0.1707 | 0.6057 | 102.5806 |
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| No log | 2.0 | 116 | 0.0689 | 0.0689 | 0.2625 | 0.1432 | 0.7242 | 112.9846 |
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| No log | 3.0 | 174 | 0.0400 | 0.0400 | 0.1999 | 0.0859 | 0.8399 | 102.6132 |
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| No log | 4.0 | 232 | 0.0402 | 0.0402 | 0.2005 | 0.0745 | 0.8389 | 103.3228 |
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| No log | 5.0 | 290 | 0.0337 | 0.0337 | 0.1836 | 0.0665 | 0.8650 | 101.0925 |
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| No log | 6.0 | 348 | 0.0327 | 0.0327 | 0.1808 | 0.0618 | 0.8691 | 101.2324 |
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### Framework versions
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- Transformers 4.21.0
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- Pytorch 1.12.0+cu113
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- Datasets 2.4.0
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- Tokenizers 0.12.1
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