---
license: apache-2.0
library_name: transformers
pipeline_tag: text-generation
tags:
- merge
- moe
- biology
- medical
- MoE
---

## How to use it

```python
# Use a pipeline as a high-level helper
from transformers import pipeline

pipe = pipeline("text-generation", model="MaziyarPanahi/Bioxtral-4x7B-v0.1")

# Load model directly
from transformers import AutoTokenizer, AutoModelForCausalLM

tokenizer = AutoTokenizer.from_pretrained("MaziyarPanahi/Bioxtral-4x7B-v0.1")
model = AutoModelForCausalLM.from_pretrained("MaziyarPanahi/Bioxtral-4x7B-v0.1")
```


## Quantized mode

Here is the list of GGUF models quantized from 2 to 8 bits: https://huggingface.co./MaziyarPanahi/Bioxtral-4x7B-v0.1-GGUF

## Examples


A 23-year-old pregnant woman at 22 weeks gestation presents with burning upon urination. She states it started 1 day ago and has been worsening despite drinking more water and taking cranberry extract. She otherwise feels well and is followed by a doctor for her pregnancy. Her temperature is 97.7°F (36.5°C), blood pressure is 122/77 mmHg, pulse is 80/min, respirations are 19/min, and oxygen saturation is 98% on room air. Physical exam is notable for an absence of costovertebral angle tenderness and a gravid uterus. Which of the following is the best treatment for this patient?

{ "A": "Ampicillin", "B": "Ceftriaxone", "C": "Doxycycline", "D": "Nitrofurantoin" }

```
The best treatment option for this patient would be **D: Nitrofurantoin**. This choice is in accordance with current guidelines recommending nitrofurantoin as the first line agent for uncomplicated lower UTI during pregnancy due to its safety profile. Although ampicillin and ceftriaxone may also be used if there is concern for pyelonephritis or resistance, they should generally be reserved for more severe cases. Doxycycline is contraindicated in pregnancy.</s>
```


A 67-year-old woman with advanced bladder cancer comes to the physician for a follow-up examination. She is currently undergoing chemotherapy with an agent that forms cross-links between DNA strands. Serum studies show a creatinine concentration of 2.1 mg/dL and a blood urea nitrogen concentration of 30 mg/dL. Urine dipstick of a clean-catch midstream specimen shows 2+ protein and 1+ glucose. Prior to initiation of chemotherapy, her laboratory values were within the reference range. In addition to hydration, administration of which of the following would most likely have prevented this patient's current condition?

{ "A": "Mesna", "B": "Amifostine", "C": "Rasburicase", "D": "Leucovorin" }


```
B: Amifostine</s>
```


describe about pros and cons of docker system.

```
Answer:

Docker is an open-source platform for developing, shipping, and running applications by using containers. Like all technologies, Docker has its advantages and disadvantages. Here are some key points on both sides:

Pros (Advantages) of Docker:
1. **Portability**: One of the main benefits of Docker is its ability to create portable containers holding an application with all its dependencies. This makes it easy to run the same application consistently across different environments such as development, testing, and production.
2. **Efficiency**: Containers are lightweight and use resources efficiently compared to virtual machines. This allows more applications to be hosted on a single server.
3. **Simplified deployment**: With Docker, developers can package their code along with all its dependencies into a container which can then be deployed easily without worrying about compatibility issues.
4. **Improved collaboration**: Docker provides tools like Docker Hub which allow developers to share their images publicly or privately. This promotes collaboration among teams working on the same project.
5. **Automation**: Docker integrates well with many continuous integration and delivery systems, making it easier to automate the building, testing, and deploying of applications.

Cons (Disadvantages) of Docker:
1. **Steep learning curve**: For those new to containerization technology, there may be a significant learning curve involved in understanding how Docker works and mastering its commands.
2. **Additional management overhead**: Managing Docker containers requires additional effort compared to traditional methods. This includes tasks like monitoring, scaling, and orchestrating containers.
3. **Potential security risks**: While Docker itself is secure, improper configuration of containers could lead to potential vulnerabilities. It’s important to follow best practices when creating and managing containers.
4. **Vendor lock-in**: Although Docker is open source, if your organization relies heavily on proprietary extensions from Docker Inc., switching to another solution might become difficult.
5. **Limited storage**: Each container has its own file system, so storing large amounts of data within the container can be challenging. To address this issue, Docker Volumes were introduced but they require separate management.</s>
```


Hi, I need to get from New York to Los Angeles. Can you help me with that?
```

```tool_call
{
 "arguments": {"origin": "New York", "destination": "Los Angeles", "mode": ""},
 "name": "get_directions"
}
```</s>

```


There are three killers in a room. Someone enters the room and kills one of them. Nobody leaves the room. How many killers are left in the room? Explain your reasoning step by step.

```
1. Initially, there are three killers in the room.
2. Then, someone else comes into the room and kills one of these three killers.
3. However, this "someone" is also considered as a person or killer (since they committed an act of killing).
4. So after the event, we have four people in total - the remaining two original killers plus the newcomer who killed one of the initial killers.
5. But since our question asks for the number of killers, we should only count those who were originally killers before anyone acted.
6. Therefore, there are still two killers left in the room.
```
Answer should be 3, the new person walking in is also a killer!


Mark is faster than Mary , Mary is faster than Joe. Is Joe faster than Mark? Let's think step by step

```
Let's analyze the given statements one by one:

1. Mark is faster than Mary.
2. Mary is faster than Joe.

Now, let's try to determine the relative speeds of all three individuals based on these statements:

- From statement 1, we know that Mark has a higher speed compared to Mary.
- From statement 2, we know that Mary has a higher speed compared to Joe.

Combining both pieces of information, we can conclude that Mark must have the highest speed among the three (since he is faster than Mary and Mary is faster than Joe). Therefore, Joe is not faster than Mark.</s>
```


If I lay 2 wet shirts out in the sun flat on the ground to dry and it takes 5 hours until they are dry, how long would it take to dry 4 shirts of the same type that way simultanously? 

```
Assuming that the drying process is not limited by any other factor than the surface area exposed to the sunlight, we can use a simple proportionality argument.

If 2 shirts take 5 hours to dry when laid flat on the ground, then the combined surface area of these two shirts is equivalent to the drying time of 5 hours. Let's call this surface area equivalent to 5 "drying-hours per unit area."

Now, if we have 4 shirts of the same type and we lay them all flat on the ground at the same time, their combined surface area will be greater than that of the two previously dried shirts. However, since they are all of the same type, we can assume that the ratio of their surface areas to the drying time of 5 hours remains constant. In other words, the 4 new shirts will also have a surface area equivalent to 5 "drying-hours per unit area."

To find out how long it would take for these 4 shirts to dry simultaneously, we need to divide the total drying time (5 hours) by the number of shirts (4). This gives us:

Drying time for 4 shirts = Total drying time / Number of shirts
                        = 5 hours / 4
                        = 1.25 hours per shirt

So, it would take approximately 1 hour and 15 minutes (or 75 minutes) for the 4 shirts to dry simultaneously under the same conditions as the original 2 shirts.</s>
```
Wow! Way to go to be wrong! It's the same, they are drying not baking! 


explain step by step 25-4*2+3=?
```
Step 1: Identify the multiplication operation first. In this case, it is "4 * 2".

Step 2: Perform the multiplication. Multiplying 4 and 2 gives you 8.

Step 3: Now we have the expression "25 - 8 + 3". 

Step 4: Solve the subtraction next. Subtracting 8 from 25 gives you 17.

Step 5: Finally, add 3 to the result of the previous step. Adding 3 to 17 gives you a final answer of 20.

So, 25 - 4 * 2 + 3 = 20.</s>
```


## Eval

![image/png](https://cdn-uploads.huggingface.co/production/uploads/5fd5e18a90b6dc4633f6d292/PR-Py7u6uhcxKTdCpPY4-.png)

| Metric                      | BioMistral-7B | Bioxtral-4x7B-v0.1 |
|-----------------------------|---------------|--------------------|
| **Average**                | 54.99         | **70.84**              |
| ARC                         | 54.27         | **68.34**              |
| HellaSwag                   | 79.09         | **87.27**              |
| TruthfulQA                  | 51.61         | **68.45**              |
| Winogrande                  | 73.48         | **82.90**              |
| GSM8K                       | 0             | **56.63**              |
| Professional Medicine       | 55.51         | **67.3**               |
| College Medicine            | 58.96         | **61.84**              |
| Medical Genetics            | 67.00         | **74.0**               |


source: https://huggingface.co./datasets/open-llm-leaderboard/details_MaziyarPanahi__Bioxtral-4x7B-v0.1

```python
{
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        "mc1": 0.5152998776009792,
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        "mc2": 0.6845419346695587,
        "mc2_stderr": 0.014829461272743373
    },
    "harness|arc:challenge|25": {
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    "harness|hellaswag|10": {
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        "acc_norm_stderr": 0.028380919596145866
    },
    "harness|truthfulqa:mc|0": {
        "mc1": 0.5152998776009792,
        "mc1_stderr": 0.017495304473187902,
        "mc2": 0.6845419346695587,
        "mc2_stderr": 0.014829461272743373
    },
    "harness|winogrande|5": {
        "acc": 0.8287292817679558,
        "acc_stderr": 0.010588417294962524
    },
    "harness|gsm8k|5": {
        "acc": 0.5663381349507203,
        "acc_stderr": 0.013650728047064688
    }
}

```