Upload adapter model

Model-Subcellular_Localization-35M.zip

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+version https://git-lfs.github.com/spec/v1
+oid sha256:8d716abacf6c0e705dddc56718988d47b2cf23183bc4cc4aa1fba097964cd9b9
+size 3568758

README.md

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+
+---
+
+base_model: westlake-repl/SaProt_35M_AF2 
+
+library_name: peft
+
+---
+
+
+
+# Model Card for Model-Subcellular_Localization-35M 
+This model is used for the Subcellular Localization Classification Task. It takes a protein sequence as input and outputs which of the 10 categories the protein belongs to.
+
+## Task type
+Protein-level Classification
+
+## Model input type
+SA Sequence
+
+## Label meanings
+
+0: Nucleus
+
+1: Cytoplasm
+
+2: Extracellular
+
+3: Mitochondrion
+
+4: Cell.membrane
+
+5: Endoplasmic.reticulum
+
+6: Plastid
+
+7: Golgi.apparatus
+
+8: Lysosome/Vacuole
+
+9: Peroxisome
+
+
+## LoRA config
+
+- **r:** 8
+- **lora_dropout:** 0.0
+- **lora_alpha:** 16
+- **target_modules:** ['query', 'intermediate.dense', 'key', 'value', 'output.dense']
+- **modules_to_save:** ['classifier']
+
+## Training config
+
+- **optimizer:**
+  - **class:** AdamW
+  - **betas:** (0.9, 0.98)
+  - **weight_decay:** 0.01
+- **learning rate:** 0.001
+- **epoch:** 1
+- **batch size:** 2
+- **precision:** 16-mixed 
+

adapter_config.json

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+{
+  "alpha_pattern": {},
+  "auto_mapping": null,
+  "base_model_name_or_path": "westlake-repl/SaProt_35M_AF2",
+  "bias": "none",
+  "fan_in_fan_out": false,
+  "inference_mode": true,
+  "init_lora_weights": true,
+  "layer_replication": null,
+  "layers_pattern": null,
+  "layers_to_transform": null,
+  "loftq_config": {},
+  "lora_alpha": 16,
+  "lora_dropout": 0.0,
+  "megatron_config": null,
+  "megatron_core": "megatron.core",
+  "modules_to_save": [
+    "classifier"
+  ],
+  "peft_type": "LORA",
+  "r": 8,
+  "rank_pattern": {},
+  "revision": null,
+  "target_modules": [
+    "query",
+    "intermediate.dense",
+    "key",
+    "value",
+    "output.dense"
+  ],
+  "task_type": "SEQ_CLS",
+  "use_dora": false,
+  "use_rslora": false
+}

adapter_model.safetensors

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+version https://git-lfs.github.com/spec/v1
+oid sha256:102d457dbbc1de9612cd41c12a58a1dbf288dd9d2837024bfb36296e068b4d94
+size 4265400

metadata.json

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+{
+    "training_data_type": "SA"
+}